Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122268880 Ptep1.0/2.0 NW_024969600.1 7139 67037 + uncharacterized LOC122268880 aug3.g20419,aug3.g2618,aug3.g992,aug3.g9119,aug3.g22620,aug3.g13289 NA 0
LOC107446398 Ptep1.0/2.0 NW_024969605.1 298567 402227 + protein tyrosine phosphatase domain-containing protein 1-like aug3.g6144,aug3.g1324 LOC107454260,LOC107446398 0
LOC107437797 Ptep1.0/2.0 NW_024969615.1 2044528 2048038 - alpha-latrocrustotoxin-Lt1a-like aug3.g26321,aug3.g13261,aug3.g24167 LOC107437797 0
LOC107445924 Ptep1.0/2.0 NW_024969635.1 1969234 1973943 - uncharacterized LOC107445924 aug3.g132 LOC107445924 0
LOC107438659 Ptep1.0/2.0 NW_024969646.1 3050198 3348881 + protein O-mannosyl-transferase TMTC2 aug3.g13267,aug3.g255 LOC107438659 0
LOC107439276 Ptep1.0/2.0 NW_024969646.1 3505001 3776948 + multiple epidermal growth factor-like domains protein 6 aug3.g13671,aug3.g13268 LOC107439276 0
LOC107438693 Ptep1.0/2.0 NW_024969707.1 644421 685504 + uncharacterized LOC107438693 aug3.g13294 LOC107438693 0
LOC107438690 Ptep1.0/2.0 NW_024969707.1 693461 727633 - NAD-dependent protein deacetylase sirtuin-1 aug3.g13293,aug3.g13294 LOC107438690 0
LOC122268245 Ptep1.0/2.0 NW_024969729.1 993004 1011597 - uncharacterized LOC122268245 aug3.g13221 NA 0
LOC107438608 Ptep1.0/2.0 NW_024969729.1 1016330 1031627 - uncharacterized LOC107438608 aug3.g13222 LOC107438608 0
LOC107438609 Ptep1.0/2.0 NW_024969729.1 1036405 1099145 - GRIP and coiled-coil domain-containing protein 2 aug3.g13224,aug3.g13223 LOC107438609 0
LOC107438611 Ptep1.0/2.0 NW_024969729.1 1087566 1090683 - F-box/WD repeat-containing protein 1A-like aug3.g13225 LOC107438611 0
LOC107438610 Ptep1.0/2.0 NW_024969729.1 1091118 1188017 + diacylglycerol kinase delta aug3.g13226,aug3.g13227 LOC107438610 0
LOC107438613 Ptep1.0/2.0 NW_024969729.1 1189460 1209236 - uncharacterized LOC107438613 aug3.g13227 LOC107438613 0
LOC107438614 Ptep1.0/2.0 NW_024969729.1 1220653 1227990 + uncharacterized LOC107438614 aug3.g13228 LOC107438614 0
LOC107438605 Ptep1.0/2.0 NW_024969729.1 1239818 1284950 - E3 SUMO-protein ligase RanBP2 aug3.g13229,aug3.g3981 LOC107438605 0
LOC107438615 Ptep1.0/2.0 NW_024969729.1 1285204 1312258 + cilia- and flagella-associated protein 52-like aug3.g13230 LOC107438615 0
LOC107446421 Ptep1.0/2.0 NW_024969774.1 1018887 1022795 + uncharacterized LOC107446421 aug3.g1329 LOC107446421 0
LOC107446432 Ptep1.0/2.0 NW_024969774.1 1027680 1046122 - eukaryotic translation initiation factor 4E type 2 aug3.g1328 LOC107446432 0
LOC107446431 Ptep1.0/2.0 NW_024969774.1 1055091 1111650 + uncharacterized LOC107446431 aug3.g1326 LOC107446431 0
LOC107441488 Ptep1.0/2.0 NW_024969781.1 1155774 1160755 - uncharacterized LOC107441488 aug3.g15941,aug3.g13205 LOC107441488 0
LOC107437730 Ptep1.0/2.0 NW_024969812.1 480250 481548 + zinc finger protein OZF aug3.g26320,aug3.g13220,aug3.g13219 LOC107437730 0
LOC107438603 Ptep1.0/2.0 NW_024969812.1 487973 490034 + gastrula zinc finger protein XlCGF46.1-like aug3.g13220 LOC107438603 0
LOC107438602 Ptep1.0/2.0 NW_024969812.1 495394 497374 + zinc finger protein 585B-like aug3.g13219 LOC107438602 0
LOC107438601 Ptep1.0/2.0 NW_024969812.1 506740 529174 + CCR4-NOT transcription complex subunit 9 aug3.g13218 LOC107438601 0
LOC107438600 Ptep1.0/2.0 NW_024969812.1 564195 580602 + uncharacterized LOC107438600 aug3.g13216 LOC107438600 0
LOC107448698 Ptep1.0/2.0 NW_024969844.1 478 28712 + ribosome biogenesis protein bop1 aug3.g13298,aug3.g20407 LOC107448698 0
LOC107438696 Ptep1.0/2.0 NW_024969844.1 34593 35367 - dnaJ homolog subfamily C member 9-like aug3.g13297 LOC107438696 0
LOC107438694 Ptep1.0/2.0 NW_024969844.1 130445 311638 - alkaline phosphatase aug3.g13296 LOC107438694 0
LOC122269580 Ptep1.0/2.0 NW_024969865.1 242681 246363 + uncharacterized LOC122269580 aug3.g12855,aug3.g18531,aug3.g1325,aug3.g19728 NA 0
LOC107438644 Ptep1.0/2.0 NW_024969890.1 18474 47599 - adenomatous polyposis coli homolog aug3.g13252 LOC107438644 0
LOC122269655 Ptep1.0/2.0 NW_024969890.1 48138 77017 - uncharacterized LOC122269655 aug3.g13252 LOC107438644 0
LOC122270284 Ptep1.0/2.0 NW_024970119.1 635551 636513 - uncharacterized LOC122270284 aug3.g13206 NA 0
LOC122270369 Ptep1.0/2.0 NW_024970151.1 413378 420211 - uncharacterized LOC122270369 aug3.g26311,aug3.g13236,aug3.g2702,aug3.g10395,aug3.g1161,aug3.g8144,aug3.g7382,aug3.g19178,aug3.g3729,aug3.g25012 NA 0
LOC122270495 Ptep1.0/2.0 NW_024970210.1 250991 252578 - uncharacterized LOC122270495 aug3.g13236,aug3.g15409,aug3.g12705,aug3.g17624,aug3.g16436,aug3.g25831 NA 0
LOC107438641 Ptep1.0/2.0 NW_024970218.1 160092 282110 + transcription factor Sox-13 aug3.g13250 LOC107438641 0
LOC107438639 Ptep1.0/2.0 NW_024970218.1 286861 295996 - serine/threonine-protein kinase RIO1 aug3.g13249 LOC107438639 0
LOC107438640 Ptep1.0/2.0 NW_024970218.1 295978 308525 + KRR1 small subunit processome component homolog aug3.g13248 LOC107438640 0
LOC107438637 Ptep1.0/2.0 NW_024970218.1 310046 319438 - coiled-coil-helix-coiled-coil-helix domain-containing protein 2 aug3.g13247 LOC107438637 0
LOC107438636 Ptep1.0/2.0 NW_024970218.1 324589 343091 - cyclin-H aug3.g13246 LOC107438636 0
LOC107438633 Ptep1.0/2.0 NW_024970218.1 343187 368135 + dystrobrevin beta aug3.g13245 LOC107438633 0
LOC107438634 Ptep1.0/2.0 NW_024970218.1 370227 402324 - ATP-dependent RNA helicase DDX24 aug3.g13244 LOC107438634 0
LOC107438635 Ptep1.0/2.0 NW_024970218.1 402401 413070 + vacuolar protein sorting-associated protein 28 homolog aug3.g13243 LOC107438635 0
LOC107438628 Ptep1.0/2.0 NW_024970218.1 418211 419455 - uncharacterized protein C16orf52 homolog A-like aug3.g13242 LOC107438628 0
LOC107438632 Ptep1.0/2.0 NW_024970218.1 425782 438375 - AFG3-like protein 1 aug3.g13241 LOC107438632 0
LOC107438630 Ptep1.0/2.0 NW_024970218.1 441524 461853 - amiloride-sensitive sodium channel subunit gamma-like aug3.g13240 LOC107438630 0
LOC107438629 Ptep1.0/2.0 NW_024970218.1 477314 511892 + uncharacterized LOC107438629 aug3.g13239 LOC107438629 0
LOC122270560 Ptep1.0/2.0 NW_024970244.1 338870 350726 - uncharacterized LOC122270560 aug3.g555,aug3.g27021,aug3.g3303,aug3.g24086,aug3.g25561,aug3.g25737,aug3.g11378,aug3.g26737,aug3.g23862,aug3.g13207,aug3.g25176,aug3.g23432,aug3.g27815,aug3.g4200,aug3.g26053,aug3.g25031,aug3.g24630,aug3.g22423,aug3.g17890,aug3.g15308,aug3.g6826,aug3.g22 NA 0
LOC107436909 Ptep1.0/2.0 NW_024970255.1 150793 236725 - transmembrane protein 132E-like aug3.g11913,aug3.g13278 LOC107436909,LOC107438678 0
LOC107438679 Ptep1.0/2.0 NW_024970255.1 251080 257595 - lysozyme C aug3.g13279 LOC107438679 0
LOC107438676 Ptep1.0/2.0 NW_024970255.1 263825 287891 + EMI domain-containing protein 1 aug3.g13280 LOC107438676 0
LOC107438677 Ptep1.0/2.0 NW_024970255.1 292385 301061 + lysozyme 1B-like aug3.g13280 LOC107438677 0
LOC107438680 Ptep1.0/2.0 NW_024970255.1 302811 322361 - mitochondrial fission process protein 1 aug3.g13282 LOC107438680 0
LOC110282123 Ptep1.0/2.0 NW_024970255.1 325020 332156 - glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial aug3.g13283 LOC110282123 1e-130
LOC107438681 Ptep1.0/2.0 NW_024970255.1 332225 344052 + pleckstrin homology domain-containing family M member 1 aug3.g13284 LOC107438681 0
LOC107438682 Ptep1.0/2.0 NW_024970255.1 353416 369850 + tubulin alpha chain, testis-specific aug3.g13286,aug3.g21245 LOC107438682 0
LOC107438683 Ptep1.0/2.0 NW_024970255.1 382395 392372 + serine/arginine-rich splicing factor 1 aug3.g13288 LOC107438683 0
LOC107438698 Ptep1.0/2.0 NW_024970352.1 160007 179819 - retinal-binding protein aug3.g8491,aug3.g13299 LOC107438698 0
LOC122270753 Ptep1.0/2.0 NW_024970352.1 179890 195703 - SEC14-like protein 2 aug3.g13299 LOC107438698 7e-134
LOC107438666 Ptep1.0/2.0 NW_024970388.1 192602 199430 + uncharacterized LOC107438666 aug3.g13277 LOC107438666 0
LOC107438665 Ptep1.0/2.0 NW_024970388.1 203153 213382 + uncharacterized LOC107438665 aug3.g13275 LOC107438665 0
LOC107438664 Ptep1.0/2.0 NW_024970388.1 221823 223219 + beta-1,4-galactosyltransferase 7-like aug3.g13274 LOC107438664 0
LOC107438668 Ptep1.0/2.0 NW_024970388.1 230915 242435 - uncharacterized LOC107438668 aug3.g13273 LOC107438668 0
LOC107438662 Ptep1.0/2.0 NW_024970388.1 257528 278970 - uncharacterized LOC107438662 aug3.g13273 LOC107438662 0
LOC107438663 Ptep1.0/2.0 NW_024970388.1 319696 331119 + uncharacterized LOC107438663 aug3.g13272 LOC107438663 0
LOC107438661 Ptep1.0/2.0 NW_024970388.1 340276 364525 + pseudogene aug3.g13271 LOC107438661 0
LOC107455471 Ptep1.0/2.0 NW_024970405.1 52954 91858 - ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial aug3.g10881,aug3.g13202,aug3.g22637 LOC107441302,LOC107455471 0
LOC107438616 Ptep1.0/2.0 NW_024970494.1 10496 26608 - ectonucleoside triphosphate diphosphohydrolase 5-like aug3.g13233 LOC107438616 0
LOC107438620 Ptep1.0/2.0 NW_024970494.1 29480 40455 - ectonucleoside triphosphate diphosphohydrolase 6 aug3.g13233 LOC107438620 0
LOC107438621 Ptep1.0/2.0 NW_024970494.1 51202 68157 - ectonucleoside triphosphate diphosphohydrolase 6-like aug3.g13234 LOC107438621 0
LOC107438622 Ptep1.0/2.0 NW_024970494.1 71004 87548 + ectonucleoside triphosphate diphosphohydrolase 6-like aug3.g19449,aug3.g13235 LOC107438622 0
LOC107438572 Ptep1.0/2.0 NW_024970520.1 232602 318371 - uncharacterized LOC107438572 aug3.g13201,aug3.g13200 LOC107438572 0
LOC107438657 Ptep1.0/2.0 NW_024970524.1 126657 129726 - ragulator complex protein LAMTOR2-B aug3.g13263 LOC107438657 0
LOC122271033 Ptep1.0/2.0 NW_024970524.1 136811 157024 + probable serine/threonine-protein kinase DDB_G0277449 aug3.g13265,aug3.g23260,aug3.g6646 NA 0
LOC107438658 Ptep1.0/2.0 NW_024970524.1 160084 184946 - alcohol dehydrogenase class-3 aug3.g8469,aug3.g13266 LOC107438658 0
LOC107445185 Ptep1.0/2.0 NW_024970531.1 319983 321845 - uncharacterized LOC107445185 aug3.g19659,aug3.g16656,aug3.g13208 LOC107445185 0
LOC107438580 Ptep1.0/2.0 NW_024970577.1 383486 386492 - uncharacterized LOC107438580 aug3.g13206,aug3.g16787,aug3.g11562 LOC107438580 0
LOC107438650 Ptep1.0/2.0 NW_024970581.1 237125 294686 - mediator of RNA polymerase II transcription subunit 14 aug3.g13257,aug3.g18847 LOC107445968,LOC107438650 0
LOC107438648 Ptep1.0/2.0 NW_024970581.1 294746 296333 + putative E3 ubiquitin-protein ligase UBR7 aug3.g13256,aug3.g13255,aug3.g24574 LOC107438648 0
LOC122271151 Ptep1.0/2.0 NW_024970602.1 225644 226128 + uncharacterized LOC122271151 aug3.g1329 NA 8e-156
LOC107438589 Ptep1.0/2.0 NW_024970978.1 55162 99006 + protein stum homolog aug3.g13215 LOC107438589 0
LOC107438588 Ptep1.0/2.0 NW_024970978.1 111037 126641 + synaptotagmin-C aug3.g13214 LOC107438588 0
LOC107438585 Ptep1.0/2.0 NW_024970978.1 133464 136776 - cysteine-rich protein 2-binding protein aug3.g13213,aug3.g13212 LOC107438585 0
LOC107438587 Ptep1.0/2.0 NW_024970978.1 136937 142783 + uncharacterized LOC107438587 aug3.g13211 LOC107438587 1e-126
LOC107438583 Ptep1.0/2.0 NW_024970978.1 150288 176079 - polyribonucleotide nucleotidyltransferase 1, mitochondrial aug3.g13210 LOC107438583 0
LOC122271750 Ptep1.0/2.0 NW_024971117.1 8570 9648 - uncharacterized LOC122271750 aug3.g13229 NA 0
LOC107438652 Ptep1.0/2.0 NW_024971492.1 35850 51361 - mRNA decay activator protein ZFP36L1 aug3.g13259 LOC107438652 0
LOC107438623 Ptep1.0/2.0 NW_024971631.1 9454 52245 + ectonucleoside triphosphate diphosphohydrolase 5 aug3.g13231 LOC107438623 0
LOC107438619 Ptep1.0/2.0 NW_024971631.1 53529 88956 - ectonucleoside triphosphate diphosphohydrolase 5 aug3.g13233,aug3.g13232 LOC107438619 0
LOC107438647 Ptep1.0/2.0 NW_024971828.1 30736 37768 - trafficking protein particle complex subunit 3 aug3.g13254 LOC107438647 0
LOC107445082 Ptep1.0/2.0 NW_024971887.1 3390 15748 - protein unc-93 homolog A-like aug3.g18295,aug3.g13271,aug3.g8235,aug3.g8238 LOC107445082 0
LOC107438684 Ptep1.0/2.0 NW_024972209.1 806 31009 + probable GPI-anchored adhesin-like protein PGA55 aug3.g13290 LOC107438684 1e-56
LOC122272808 Ptep1.0/2.0 NW_024972891.1 19270 27328 - uncharacterized LOC122272808 aug3.g13237 LOC107438627 1e-126
LOC122272848 Ptep1.0/2.0 NW_024973068.1 2655 12150 - uncharacterized LOC122272848 aug3.g13251 NA 3e-59
LOC107438607 Ptep1.0/2.0 NW_024974546.1 4522 4914 - uncharacterized LOC107438607 aug3.g13221 LOC107438607 0
LOC122273641 Ptep1.0/2.0 NW_024978032.1 2548 7230 + STAM-binding protein-like aug3.g13251 NA 5e-52
LOC122273649 Ptep1.0/2.0 NW_024978130.1 2225 4057 + uncharacterized LOC122273649 aug3.g13271 NA 0
LOC122273713 Ptep1.0/2.0 NW_024978992.1 684 2673 + uncharacterized LOC122273713 aug3.g13229 NA 4e-156
98 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02