Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446427 Ptep1.0/2.0 NW_024969774.1 281757 329711 - sugar phosphate exchanger 3 aug3.g1337 LOC107446427 0
LOC107438788 Ptep1.0/2.0 NW_024969956.1 297344 345273 - probable sodium/potassium/calcium exchanger CG1090 aug3.g13378 LOC107438788 0
LOC107438787 Ptep1.0/2.0 NW_024969956.1 351452 367832 + UPF0669 protein C6orf120 homolog aug3.g13377 LOC107438787 0
LOC107438786 Ptep1.0/2.0 NW_024969956.1 372482 375964 - ADP-ribosylation factor-like protein 16 aug3.g13376 LOC107438786 0
LOC107438785 Ptep1.0/2.0 NW_024969956.1 375976 392115 + leukocyte receptor cluster member 1 aug3.g13375 LOC107438785 0
LOC107438784 Ptep1.0/2.0 NW_024969956.1 443039 465510 + slit homolog 2 protein-like aug3.g13374 LOC107438784 0
LOC107438782 Ptep1.0/2.0 NW_024969956.1 516672 553334 + uncharacterized LOC107438782 aug3.g13373 LOC107438782 0
LOC107446983 Ptep1.0/2.0 NW_024978016.1 2247 3750 - uncharacterized LOC107446983 aug3.g1573,aug3.g13370,aug3.g23825 LOC107446983 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02