Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446424 Ptep1.0/2.0 NW_024969774.1 57821 74964 - D-glucuronyl C5-epimerase B aug3.g1341 LOC107446424 0
LOC107438868 Ptep1.0/2.0 NW_024969936.1 125128 133070 - uncharacterized LOC107438868 aug3.g13419 LOC107438868 5e-129
LOC107438873 Ptep1.0/2.0 NW_024969936.1 158700 184721 + uncharacterized LOC107438873 aug3.g13418 LOC107438873 0
LOC107438872 Ptep1.0/2.0 NW_024969936.1 188487 207649 - P2X purinoceptor 4 aug3.g13417 LOC107438872 0
LOC107438870 Ptep1.0/2.0 NW_024969936.1 208038 209432 + gastrula zinc finger protein XlCGF26.1 aug3.g13416 LOC107438870 0
LOC107438867 Ptep1.0/2.0 NW_024969936.1 225904 231622 + zinc finger HIT domain-containing protein 3 aug3.g13414 LOC107438867 3e-126
LOC107438869 Ptep1.0/2.0 NW_024969936.1 235345 315173 - NAD(+) hydrolase sarm1 aug3.g13413 LOC107438869 0
LOC107438862 Ptep1.0/2.0 NW_024970829.1 20974 163087 - sodium bicarbonate cotransporter 3 aug3.g13411 LOC107438862 0
LOC107438864 Ptep1.0/2.0 NW_024970829.1 173836 193702 - uncharacterized LOC107438864 aug3.g13410 LOC107438864 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02