Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107438881 Ptep1.0/2.0 NW_024969679.1 142803 192296 + cytochrome P450 4C1 aug3.g13428 LOC107438881 0
LOC107438883 Ptep1.0/2.0 NW_024969679.1 268916 447536 + diuretic hormone receptor aug3.g13429 LOC107438883 0
LOC107446426 Ptep1.0/2.0 NW_024969774.1 420 44812 + cell growth regulator with RING finger domain protein 1 aug3.g1342 LOC107446426 0
LOC107438880 Ptep1.0/2.0 NW_024969817.1 367261 563525 + uncharacterized LOC107438880 aug3.g13427 LOC107438880,LOC107440990 0
LOC107438878 Ptep1.0/2.0 NW_024969817.1 578340 584203 - bifunctional glutamate/proline--tRNA ligase aug3.g13426 LOC107438878 0
LOC107438877 Ptep1.0/2.0 NW_024969817.1 584407 609733 + LIM domain kinase 1 aug3.g13425 LOC107438877 0
LOC107438876 Ptep1.0/2.0 NW_024969817.1 624929 647548 + uncharacterized LOC107438876 aug3.g13424 LOC107438876 0
LOC107438875 Ptep1.0/2.0 NW_024969817.1 649144 675026 - activating signal cointegrator 1 aug3.g13423 LOC107438875 0
LOC107438874 Ptep1.0/2.0 NW_024969936.1 35578 114700 + extensin aug3.g13420,aug3.g13421 LOC107438874 0
LOC122273480 Ptep1.0/2.0 NW_024976469.1 168 3810 - LIM domain kinase 1-like aug3.g13425 LOC107438877 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02