Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107439081 Ptep1.0/2.0 NW_024969698.1 1239285 1243666 + uncharacterized LOC107439081 aug3.g13551 LOC107439081 0
LOC107446516 Ptep1.0/2.0 NW_024969740.1 600965 678067 - UDP-glucose:glycoprotein glucosyltransferase 1 aug3.g1355 LOC107446516 0
LOC107438137 Ptep1.0/2.0 NW_024969793.1 699616 824568 + formin-J-like aug3.g26411,aug3.g15945,aug3.g16965,aug3.g18789,aug3.g3845,aug3.g20638,aug3.g27431,aug3.g11569,aug3.g26749,aug3.g13556,aug3.g568,aug3.g15812,aug3.g22828,aug3.g12149,aug3.g5637,aug3.g892,aug3.g8296,aug3.g18962,aug3.g6082,aug3.g24558,aug3.g9808,aug3.g2790,a LOC107438137 0
LOC107439078 Ptep1.0/2.0 NW_024969899.1 170633 172491 + uncharacterized LOC107439078 aug3.g13553,aug3.g18096,aug3.g18812,aug3.g2370,aug3.g11332,aug3.g7029,aug3.g1476 LOC107439078 0
LOC107437761 Ptep1.0/2.0 NW_024969975.1 466465 467922 - uncharacterized LOC107437761 aug3.g12560,aug3.g10934,aug3.g2369,aug3.g18156,aug3.g27665,aug3.g13554,aug3.g16210,aug3.g22807,aug3.g17498 LOC107437761 0
LOC107439084 Ptep1.0/2.0 NW_024970425.1 300204 361211 - gamma-aminobutyric acid receptor subunit beta-like aug3.g13557 LOC107439084 0
LOC107439086 Ptep1.0/2.0 NW_024971071.1 59987 67060 + intracellular coagulation inhibitor 1 aug3.g13559,aug3.g13560 LOC107439086 0
LOC107439085 Ptep1.0/2.0 NW_024973517.1 10303 12393 - uncharacterized LOC107439085 aug3.g13559 LOC107439085 5e-95
LOC107439077 Ptep1.0/2.0 NW_024973909.1 1466 2231 - uncharacterized LOC107439077 aug3.g13552,aug3.g5454 LOC107439077 0
LOC122273927 Ptep1.0/2.0 NW_024983480.1 470 1025 + UDP-glucose:glycoprotein glucosyltransferase 1-like aug3.g1355 LOC107446516 2e-115
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02