Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107439313 Ptep1.0/2.0 NW_024969811.1 67074 190673 - ankyrin repeat domain-containing protein SOWAHB aug3.g13697,aug3.g17187 LOC107439313 0
LOC107439315 Ptep1.0/2.0 NW_024969811.1 205055 277981 + iroquois-class homeodomain protein IRX-4 aug3.g13696 LOC107439315 0
LOC107446548 Ptep1.0/2.0 NW_024970178.1 215221 288078 + polycomb group protein Psc aug3.g1369 LOC107446548 0
LOC122270978 Ptep1.0/2.0 NW_024970485.1 341891 345502 - uncharacterized LOC122270978 aug3.g13699 NA 5e-110
LOC107439316 Ptep1.0/2.0 NW_024970485.1 346729 363104 - sodium-coupled monocarboxylate transporter 2-like aug3.g13699 LOC107439316 0
LOC107439308 Ptep1.0/2.0 NW_024970591.1 14092 42072 - uncharacterized LOC107439308 aug3.g13690 LOC107439308 0
LOC110283175 Ptep1.0/2.0 NW_024971461.1 45933 59761 - uncharacterized LOC110283175 aug3.g13695 LOC110283175 0
LOC107439312 Ptep1.0/2.0 NW_024971461.1 55663 59496 - uncharacterized LOC107439312 aug3.g13693,aug3.g13694 LOC107439312 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02