Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107439661 Ptep1.0/2.0 NW_024969639.1 235569 249636 + gamma-secretase subunit Aph-1 aug3.g13938 LOC107439661 0
LOC107439660 Ptep1.0/2.0 NW_024969639.1 260187 261267 - growth arrest and DNA damage-inducible proteins-interacting protein 1 aug3.g13937 LOC107439660 0
LOC107439657 Ptep1.0/2.0 NW_024969639.1 276667 486997 - arrestin domain-containing protein 2 aug3.g13936,aug3.g25677 LOC107439657 0
LOC107448675 Ptep1.0/2.0 NW_024969751.1 987408 1334429 - potassium voltage-gated channel subfamily H member 2 aug3.g13934,aug3.g20401,aug3.g13933 LOC107448675 0
LOC107439655 Ptep1.0/2.0 NW_024969751.1 1353856 1375367 - metacaspase-2 aug3.g13932 LOC107439655 0
LOC107439654 Ptep1.0/2.0 NW_024969751.1 1375508 1393159 + endoplasmic reticulum-Golgi intermediate compartment protein 2 aug3.g13931,aug3.g8416 LOC107439654 0
LOC122269184 Ptep1.0/2.0 NW_024969754.1 635461 672370 + uncharacterized LOC122269184 aug3.g13933 NA 8e-19
LOC122270916 Ptep1.0/2.0 NW_024970445.1 392088 392954 - uncharacterized LOC122270916 aug3.g10018,aug3.g13930 NA 0
LOC107446584 Ptep1.0/2.0 NW_024971095.1 94608 112903 + uncharacterized protein KIAA0930 homolog aug3.g1393 LOC107446584 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02