Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107451794 Ptep1.0/2.0 NW_024969937.1 527099 531556 - uncharacterized LOC107451794 aug3.g14014 LOC107451794 4e-66
LOC122270568 Ptep1.0/2.0 NW_024970246.1 326710 327722 - ribonuclease H-like aug3.g14014 NA 0
LOC107446586 Ptep1.0/2.0 NW_024970382.1 141837 235693 - Ig-like and fibronectin type-III domain-containing protein 1 aug3.g1401 LOC107446586 0
LOC107439758 Ptep1.0/2.0 NW_024970647.1 13713 70608 + protein lap4 aug3.g14019 LOC107439758 0
LOC107439730 Ptep1.0/2.0 NW_024971127.1 12678 50658 + presenilin-1 aug3.g14013 LOC107439730 0
LOC107439727 Ptep1.0/2.0 NW_024971127.1 53606 129805 - regulator of G-protein signaling 7 aug3.g14012 LOC107439727 0
LOC107439729 Ptep1.0/2.0 NW_024971127.1 131425 140542 + zinc finger protein 618 aug3.g14010,aug3.g18700,aug3.g22312 LOC110281923,LOC107439729 0
LOC107439756 Ptep1.0/2.0 NW_024971365.1 14288 61097 - SLAIN motif-containing protein-like aug3.g14016 LOC107439756 0
LOC122271974 Ptep1.0/2.0 NW_024971365.1 61240 68443 + uncharacterized LOC122271974 aug3.g14017 NA 1e-94
LOC107439757 Ptep1.0/2.0 NW_024971812.1 29341 49238 - thymidine phosphorylase-like aug3.g14018 LOC107439757 0
LOC122273492 Ptep1.0/2.0 NW_024976619.1 1718 3594 + uncharacterized LOC122273492 aug3.g14015 NA 7e-158
LOC122273778 Ptep1.0/2.0 NW_024980116.1 1906 2817 - uncharacterized LOC122273778 aug3.g14014 NA 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02