Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107456921 Ptep1.0/2.0 NW_024969987.1 460935 531977 + CD9 antigen aug3.g8947,aug3.g6589,aug3.g15183,aug3.g14221,aug3.g16461,aug3.g9719,aug3.g16641,aug3.g11079 LOC107456921 0
LOC107440059 Ptep1.0/2.0 NW_024970118.1 2805 59209 + uncharacterized LOC107440059 aug3.g14226 LOC107440059 0
LOC107440057 Ptep1.0/2.0 NW_024970118.1 169012 175222 + protein HAIKU1-like aug3.g14225 LOC107440057 0
LOC107440058 Ptep1.0/2.0 NW_024970118.1 209615 214184 + endocuticle structural glycoprotein SgAbd-8-like aug3.g14224 LOC107440058 0
LOC107440056 Ptep1.0/2.0 NW_024970118.1 246783 250172 - heterogeneous nuclear ribonucleoprotein U-like protein 1 aug3.g14223 LOC107440056 0
LOC107440060 Ptep1.0/2.0 NW_024970333.1 148 6724 + mitochondrial folate transporter/carrier-like aug3.g14227 LOC107440060 0
LOC122268369 Ptep1.0/2.0 NW_024970333.1 6597 21305 + uncharacterized LOC122268369 aug3.g14226 LOC107440059 0
LOC107446692 Ptep1.0/2.0 NW_024970984.1 166543 171529 - keratin-associated protein 19-2-like aug3.g1422 LOC107446692 0
LOC107446688 Ptep1.0/2.0 NW_024970984.1 181841 186195 - keratin-associated protein 19-2-like aug3.g1422 LOC107446688 0
LOC122272495 Ptep1.0/2.0 NW_024972128.1 33235 33982 - uncharacterized LOC122272495 aug3.g21090,aug3.g14220 NA 0
LOC107451214 Ptep1.0/2.0 NW_024976188.1 370 1833 - rho-related BTB domain-containing protein 3-like aug3.g15809,aug3.g21425,aug3.g22048,aug3.g14229 LOC107451214 0
LOC122274095 Ptep1.0/2.0 NW_024991803.1 349 1408 - uncharacterized LOC122274095 aug3.g7024,aug3.g14222,aug3.g12845,aug3.g15728,aug3.g24559,aug3.g5964,aug3.g23517 NA 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02