Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107440108 Ptep1.0/2.0 NW_024969675.1 792926 808188 - N-acylneuraminate cytidylyltransferase A-like aug3.g14269 LOC107440108 0
LOC107440111 Ptep1.0/2.0 NW_024969675.1 808297 833098 + arf-GAP with dual PH domain-containing protein 1 aug3.g14268 LOC107440111 0
LOC107440112 Ptep1.0/2.0 NW_024969675.1 846228 860540 + uncharacterized LOC107440112 aug3.g14267 LOC107440112 5e-95
LOC107444870 Ptep1.0/2.0 NW_024969805.1 7210 11364 + probable serine/threonine-protein kinase DDB_G0284251 aug3.g18149,aug3.g4815,aug3.g18402,aug3.g4328,aug3.g14263 LOC107444870 0
LOC107446696 Ptep1.0/2.0 NW_024970221.1 417967 453312 - coronin-7 aug3.g1426 LOC107446696 0
LOC107440103 Ptep1.0/2.0 NW_024971389.1 12710 44700 - probable ATP-dependent RNA helicase DDX5 aug3.g14265 LOC107440103 0
LOC107440104 Ptep1.0/2.0 NW_024971389.1 47547 78729 + Golgi to ER traffic protein 4 homolog aug3.g14266 LOC107440104 0
LOC107440106 Ptep1.0/2.0 NW_024972287.1 4243 25020 - zinc finger protein 134 aug3.g14264 LOC107440106 0
LOC122273756 Ptep1.0/2.0 NW_024979750.1 1044 1564 - uncharacterized LOC122273756 aug3.g14266 LOC107440104 1e-124
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02