Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107440160 Ptep1.0/2.0 NW_024970072.1 3882438 4019111 + uncharacterized LOC107440160 aug3.g14297 LOC107440160 0
LOC107437756 Ptep1.0/2.0 NW_024970188.1 402982 437777 + pancreatic lipase-related protein 2-like aug3.g20846,aug3.g14291,aug3.g12556,aug3.g18622,aug3.g20137,aug3.g27211 LOC107437756 0
LOC122270449 Ptep1.0/2.0 NW_024970188.1 496831 518955 + pancreatic lipase-related protein 2-like aug3.g14291 NA 0
LOC107446702 Ptep1.0/2.0 NW_024970221.1 262193 325149 - uncharacterized LOC107446702 aug3.g1429,aug3.g1430 LOC107446702 0
LOC107440157 Ptep1.0/2.0 NW_024970490.1 4863 141355 + zinc finger protein 423 aug3.g14296 LOC107440157 0
LOC122268223 Ptep1.0/2.0 NW_024970490.1 147372 164508 + uncharacterized LOC122268223 aug3.g14294 LOC107442406 0
LOC122271113 Ptep1.0/2.0 NW_024970575.1 74012 74449 + zinc finger protein 821-like aug3.g17163,aug3.g14298,aug3.g11543 NA 0
LOC107440138 Ptep1.0/2.0 NW_024970592.1 85 20791 + pancreatic lipase-related protein 2-like aug3.g14291 LOC107440138 0
LOC122272391 Ptep1.0/2.0 NW_024971930.1 2649 26554 + uncharacterized LOC122272391 aug3.g14296 NA 0.00000000008
LOC107440139 Ptep1.0/2.0 NW_024972366.1 6634 26933 - zinc finger protein 271 aug3.g14290,aug3.g25464,aug3.g24290 LOC107440139 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02