Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107439431 Ptep1.0/2.0 NW_024970170.1 25699 26427 + E3 SUMO-protein ligase ZBED1-like aug3.g14302 LOC107439431 0
LOC107446702 Ptep1.0/2.0 NW_024970221.1 262193 325149 - uncharacterized LOC107446702 aug3.g1429,aug3.g1430 LOC107446702 0
LOC107436711 Ptep1.0/2.0 NW_024970631.1 188811 192925 - E3 SUMO-protein ligase ZBED1 aug3.g22954,aug3.g13777,aug3.g22569,aug3.g12524,aug3.g14302 LOC107436711 0
LOC122271362 Ptep1.0/2.0 NW_024970754.1 15908 18349 + uncharacterized LOC122271362 aug3.g14309 NA 7e-88
LOC107457233 Ptep1.0/2.0 NW_024970928.1 1754 84945 - maestro heat-like repeat-containing protein family member 1 aug3.g10999,aug3.g14300,aug3.g3274 LOC107440164,LOC107457233 0
LOC107440161 Ptep1.0/2.0 NW_024970928.1 85140 112281 + protein downstream neighbor of son homolog aug3.g14301 LOC107440161 0
LOC107440163 Ptep1.0/2.0 NW_024970928.1 143192 155088 + uncharacterized LOC107440163 aug3.g14303 LOC107440163 0
LOC107440165 Ptep1.0/2.0 NW_024970928.1 160667 170223 - uncharacterized LOC107440165 aug3.g14304 LOC107440165 0
LOC122271554 Ptep1.0/2.0 NW_024970928.1 183723 191868 - uncharacterized LOC122271554 aug3.g14305 NA 0
LOC107440167 Ptep1.0/2.0 NW_024971586.1 66455 88186 + uncharacterized LOC107440167 aug3.g14306 LOC107440167 7e-55
LOC122272503 Ptep1.0/2.0 NW_024972134.1 19728 29977 + uncharacterized LOC122272503 aug3.g14300 NA 2e-69
LOC122273192 Ptep1.0/2.0 NW_024974618.1 914 3337 + uncharacterized LOC122273192 aug3.g14309 NA 3e-101
LOC122273503 Ptep1.0/2.0 NW_024976736.1 672 2372 + uncharacterized LOC122273503 aug3.g14309 NA 7e-88
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02