Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107440268 Ptep1.0/2.0 NW_024969779.1 762724 908052 + uncharacterized LOC107440268 aug3.g14410 LOC107440268 0
LOC107446680 Ptep1.0/2.0 NW_024969854.1 747562 749480 + uncharacterized protein C9orf85 aug3.g1441 LOC107446680 0
LOC107440290 Ptep1.0/2.0 NW_024970081.1 439677 473823 - sodium/potassium/calcium exchanger 3 aug3.g17459,aug3.g14415 LOC107440290 0
LOC107440291 Ptep1.0/2.0 NW_024970081.1 481752 488744 - sulfotransferase ssu-1 aug3.g14416 LOC107440291 0
LOC107440292 Ptep1.0/2.0 NW_024970081.1 493825 504173 + uncharacterized LOC107440292 aug3.g14417 LOC107440292 0
LOC107440293 Ptep1.0/2.0 NW_024970081.1 508651 533499 - fatty-acid amide hydrolase 2-A-like aug3.g14418,aug3.g25094 LOC107440293 0
LOC107440289 Ptep1.0/2.0 NW_024970081.1 566933 586337 + phosphomethylethanolamine N-methyltransferase aug3.g14419 LOC107440289 0
LOC122271968 Ptep1.0/2.0 NW_024971352.1 905 9769 - protein crumbs-like aug3.g14412 LOC107440280 0
LOC107446126 Ptep1.0/2.0 NW_024971516.1 7402 73987 + fibropellin-1 aug3.g14412,aug3.g18940 LOC107446126 0
LOC107440271 Ptep1.0/2.0 NW_024971521.1 37577 73634 - transcriptional regulator of filamentous growth FLO8 aug3.g14411,aug3.g19600,aug3.g27032 LOC107440271 0
LOC107440280 Ptep1.0/2.0 NW_024971587.1 39132 69679 - neurogenic locus Notch protein aug3.g14412,aug3.g21537 LOC107440280,LOC107451593 0
LOC107440281 Ptep1.0/2.0 NW_024971998.1 132 37243 - neurogenic locus Notch protein aug3.g14413,aug3.g18097 LOC107440281 0
LOC122273201 Ptep1.0/2.0 NW_024974661.1 2769 4544 + uncharacterized LOC122273201 aug3.g14412 NA 3e-164
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02