Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444110 Ptep1.0/2.0 NW_024969740.1 36490 37140 + uncharacterized LOC107444110 aug3.g17632,aug3.g15930,aug3.g14568 LOC107444110 0
LOC122269455 Ptep1.0/2.0 NW_024969824.1 632430 660506 + uncharacterized LOC122269455 aug3.g14564,aug3.g120 NA 0
LOC107447219 Ptep1.0/2.0 NW_024969990.1 170534 460178 + hemicentin-2 aug3.g14565,aug3.g19610,aug3.g14566 LOC107447219 0
LOC122271007 Ptep1.0/2.0 NW_024970503.1 48530 49243 + uncharacterized LOC122271007 aug3.g14564 NA 0
LOC107444931 Ptep1.0/2.0 NW_024971273.1 22162 93925 - uncharacterized LOC107444931 aug3.g20031,aug3.g18209,aug3.g14562 LOC107444931 0
LOC107446733 Ptep1.0/2.0 NW_024971315.1 86850 95940 - zinc finger protein 570 aug3.g1456 LOC107446733 0
LOC122271943 Ptep1.0/2.0 NW_024971315.1 100124 104842 - zinc finger protein 271-like aug3.g1456 NA 0
LOC107440475 Ptep1.0/2.0 NW_024971523.1 18208 22073 - uncharacterized LOC107440475 aug3.g14569 LOC107440475 0
LOC107440463 Ptep1.0/2.0 NW_024971980.1 30641 31303 + uncharacterized LOC107440463 aug3.g14563,aug3.g17471,aug3.g2692,aug3.g15146,aug3.g15297,aug3.g9920 LOC107440463 0
LOC107442812 Ptep1.0/2.0 NW_024972845.1 10172 10762 + uncharacterized LOC107442812 aug3.g14563,aug3.g6931 LOC107442812 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02