Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444790 Ptep1.0/2.0 NW_024969724.1 628342 714819 - uncharacterized LOC107444790 aug3.g14653,aug3.g26,aug3.g27155,aug3.g9262 LOC107444790 7e-29
LOC122269092 Ptep1.0/2.0 NW_024969736.1 2447737 2449902 - uncharacterized LOC122269092 aug3.g14654 NA 0
LOC107440583 Ptep1.0/2.0 NW_024969814.1 788428 875504 + uncharacterized LOC107440583 aug3.g14659 LOC107440583 0
LOC107440585 Ptep1.0/2.0 NW_024969814.1 890887 900371 + uncharacterized LOC107440585 aug3.g14657 LOC107440585 0
LOC107440582 Ptep1.0/2.0 NW_024969814.1 915749 940780 - methyltransferase-like protein 7A aug3.g14656 LOC107440582 0
LOC107440580 Ptep1.0/2.0 NW_024969814.1 945838 949006 - methyltransferase-like protein 7B aug3.g14655 LOC107440580 0
LOC122269454 Ptep1.0/2.0 NW_024969824.1 17464 19746 - uncharacterized LOC122269454 aug3.g14654 NA 2e-151
LOC107440584 Ptep1.0/2.0 NW_024970007.1 66621 68042 + uncharacterized LOC107440584 aug3.g14654 LOC107440584 0
LOC122270059 Ptep1.0/2.0 NW_024970033.1 636851 637756 + uncharacterized LOC122270059 aug3.g14654 NA 0
LOC107440573 Ptep1.0/2.0 NW_024970219.1 485261 513203 + pre-mRNA-splicing factor SPF27 aug3.g14650 LOC107440573 0
LOC122270937 Ptep1.0/2.0 NW_024970461.1 21971 23170 + uncharacterized LOC122270937 aug3.g14654 NA 0
LOC122271499 Ptep1.0/2.0 NW_024970880.1 24992 26419 + uncharacterized LOC122271499 aug3.g14654 NA 0
LOC107446780 Ptep1.0/2.0 NW_024970903.1 6628 41625 + oxysterol-binding protein 1 aug3.g1465 LOC107446780 0
LOC107440574 Ptep1.0/2.0 NW_024971091.1 85220 110537 + gastric triacylglycerol lipase-like aug3.g14651,aug3.g18995 LOC107440574 0
LOC107440576 Ptep1.0/2.0 NW_024972059.1 2078 21267 - uncharacterized LOC107440576 aug3.g14652 LOC107440576 0
LOC122272594 Ptep1.0/2.0 NW_024972320.1 5655 10836 - uncharacterized LOC122272594 aug3.g14654 NA 0
16 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02