Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107440600 Ptep1.0/2.0 NW_024969837.1 894172 925703 + hypoxanthine-guanine phosphoribosyltransferase-like aug3.g14662 LOC107440600,LOC110282169 0
LOC107440599 Ptep1.0/2.0 NW_024969837.1 932656 948522 + arginine/serine-rich coiled-coil protein 2 aug3.g14661 LOC107440599 0
LOC107452034 Ptep1.0/2.0 NW_024969918.1 897971 1048584 - uncharacterized LOC107452034 aug3.g21655,aug3.g26882,aug3.g14666 LOC107452034,LOC107439741 0
LOC107440603 Ptep1.0/2.0 NW_024969918.1 1059156 1068631 - uncharacterized LOC107440603 aug3.g14667 LOC107440603 0
LOC107440610 Ptep1.0/2.0 NW_024969918.1 1072175 1078487 + techylectin-5A-like aug3.g14668 LOC107440610 0
LOC107440604 Ptep1.0/2.0 NW_024969918.1 1096743 1103489 + uncharacterized LOC107440604 aug3.g14668 LOC107440604 0
LOC107440605 Ptep1.0/2.0 NW_024969918.1 1104234 1107823 - uncharacterized LOC107440605 aug3.g14669 LOC107440605 0
LOC122270453 Ptep1.0/2.0 NW_024970188.1 81753 83245 - uncharacterized LOC122270453 aug3.g14664 NA 1e-38
LOC122270451 Ptep1.0/2.0 NW_024970188.1 87863 148653 - uncharacterized LOC122270451 aug3.g14664 NA 0
LOC107446777 Ptep1.0/2.0 NW_024970903.1 69233 120908 + inositol hexakisphosphate kinase 3 aug3.g1467,aug3.g1466 LOC107446777 0
LOC107440596 Ptep1.0/2.0 NW_024975304.1 706 4963 - nephrin aug3.g18011,aug3.g14660,aug3.g18816 LOC107440596 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02