Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122273899 Ptep1.0/2.0 NW_024969656.1 1412075 1418044 - uncharacterized LOC122273899 aug3.g14696 NA 0
LOC107440636 Ptep1.0/2.0 NW_024969861.1 5579 164257 - nitric oxide synthase aug3.g14698,aug3.g16800,aug3.g14697 LOC107442750,LOC107440636 0
LOC107440634 Ptep1.0/2.0 NW_024970222.1 3566 21992 + uncharacterized LOC107440634 aug3.g14696,aug3.g16864 LOC107440634 0
LOC107440633 Ptep1.0/2.0 NW_024970222.1 23782 36828 + uncharacterized LOC107440633 aug3.g14694,aug3.g14693 LOC107440633 0
LOC107440628 Ptep1.0/2.0 NW_024970222.1 40276 55137 + uncharacterized LOC107440628 aug3.g14692 LOC107440628 0
LOC107440626 Ptep1.0/2.0 NW_024970222.1 60325 71529 + uncharacterized LOC107440626 aug3.g14691 LOC107440626 0
LOC107440630 Ptep1.0/2.0 NW_024970222.1 74480 86536 + uncharacterized LOC107440630 aug3.g14690 LOC107440630 0
LOC107446785 Ptep1.0/2.0 NW_024970903.1 185745 188500 - FMRFamide receptor-like aug3.g1469 LOC107446785 0
LOC122268322 Ptep1.0/2.0 NW_025017384.1 165 627 - uncharacterized LOC122268322 aug3.g14693 NA 1e-96
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02