Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446853 Ptep1.0/2.0 NW_024969795.1 434614 449017 + thioredoxin-like protein 1 aug3.g1489 LOC107446853 0
LOC107440892 Ptep1.0/2.0 NW_024970030.1 494426 577089 + uncharacterized LOC107440892 aug3.g14895 LOC107440892 0
LOC107440891 Ptep1.0/2.0 NW_024970030.1 580650 592583 + histone deacetylase complex subunit SAP30L aug3.g14894 LOC107440891 0
LOC107440893 Ptep1.0/2.0 NW_024970030.1 594824 675813 - calcitonin gene-related peptide type 1 receptor-like aug3.g14893,aug3.g22022 LOC107440893 0
LOC107440889 Ptep1.0/2.0 NW_024971063.1 11415 125366 + uncharacterized PE-PGRS family protein PE_PGRS10 aug3.g14891 LOC107440889,LOC110283174 0
LOC107440890 Ptep1.0/2.0 NW_024971063.1 147253 192838 + uncharacterized transmembrane protein DDB_G0289901 aug3.g14890 LOC107440890 0
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02