Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107441095 Ptep1.0/2.0 NW_024969778.1 1437007 1441029 + codanin-1 aug3.g15030 LOC107441095 0
LOC107441096 Ptep1.0/2.0 NW_024969778.1 1446468 1447805 - zinc finger protein 622 aug3.g15031 LOC107441096 0
LOC107441097 Ptep1.0/2.0 NW_024969778.1 1451341 1500043 - bone morphogenetic protein 2-A aug3.g15032 LOC107441097 0
LOC107441098 Ptep1.0/2.0 NW_024969778.1 1525692 1534940 - molybdate-anion transporter aug3.g15033 LOC107441098 0
LOC107441099 Ptep1.0/2.0 NW_024969778.1 1535140 1542788 + TM2 domain-containing protein CG10795 aug3.g15034 LOC107441099 0
LOC107441101 Ptep1.0/2.0 NW_024969778.1 1547046 1547710 - small nuclear ribonucleoprotein Sm D1 aug3.g15035 LOC107441101 0
LOC107441100 Ptep1.0/2.0 NW_024969778.1 1547918 1569972 + F-box only protein 21 aug3.g15036 LOC107441100 0
LOC107441102 Ptep1.0/2.0 NW_024969778.1 1571371 1595472 - E3 ubiquitin-protein ligase RGLG4 aug3.g15037 LOC107441102 0
LOC107441104 Ptep1.0/2.0 NW_024969778.1 1596811 1605784 - uncharacterized LOC107441104 aug3.g15038 LOC107441104 0
LOC107441103 Ptep1.0/2.0 NW_024969778.1 1616576 1632483 - uncharacterized LOC107441103 aug3.g15039,aug3.g15038 LOC107441103 0
LOC107446884 Ptep1.0/2.0 NW_024969797.1 839474 847003 + origin recognition complex subunit 4 aug3.g1503 LOC107446884 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02