Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446922 Ptep1.0/2.0 NW_024969679.1 1220807 1229509 - lysine-specific histone demethylase 1A aug3.g1520 LOC107446922 0
LOC122269299 Ptep1.0/2.0 NW_024969784.1 1341441 1342166 - uncharacterized LOC122269299 aug3.g15207 NA 0
LOC122269379 Ptep1.0/2.0 NW_024969803.1 2808656 2809318 - uncharacterized LOC122269379 aug3.g15207 NA 0
LOC107438515 Ptep1.0/2.0 NW_024969843.1 425441 426609 + ATP-dependent DNA helicase PIF1-like aug3.g26505,aug3.g533,aug3.g15207,aug3.g6450,aug3.g14425,aug3.g15206,aug3.g5208,aug3.g5171,aug3.g15208,aug3.g22678,aug3.g23599 LOC107438515 0
LOC122270396 Ptep1.0/2.0 NW_024970161.1 414106 415310 + uncharacterized LOC122270396 aug3.g15207 NA 0
LOC122270507 Ptep1.0/2.0 NW_024970216.1 418061 420533 - uncharacterized LOC122270507 aug3.g15207 NA 0
LOC107447952 Ptep1.0/2.0 NW_024970323.1 62258 71210 - uncharacterized LOC107447952 aug3.g15209 LOC107447952 0
LOC107447945 Ptep1.0/2.0 NW_024970323.1 78784 294815 - papilin aug3.g15203,aug3.g15205,aug3.g22172 LOC107447945 0
LOC107447980 Ptep1.0/2.0 NW_024970323.1 305832 360413 - kinesin-related protein 4 aug3.g15202 LOC107447980 0
LOC107447951 Ptep1.0/2.0 NW_024970323.1 369309 370124 + small glutamine-rich tetratricopeptide repeat-containing protein beta-like aug3.g15200 LOC107447951 0
LOC122271421 Ptep1.0/2.0 NW_024970790.1 211257 212057 - ATP-dependent DNA helicase RRM3-like aug3.g15207 NA 0
LOC122272220 Ptep1.0/2.0 NW_024971646.1 55270 58615 + uncharacterized LOC122272220 aug3.g15207 NA 4e-148
LOC122273116 Ptep1.0/2.0 NW_024974194.1 6995 7741 + uncharacterized LOC122273116 aug3.g15207 NA 0
LOC122273454 Ptep1.0/2.0 NW_024976218.1 137 819 + vacuolar protein sorting-associated protein 51 homolog aug3.g15201 NA 0
LOC122273455 Ptep1.0/2.0 NW_024976218.1 924 2204 + vacuolar protein sorting-associated protein 51 homolog aug3.g15201 NA 0
LOC122274111 Ptep1.0/2.0 NW_024992565.1 615 1346 - uncharacterized LOC122274111 aug3.g15207 NA 0
LOC122268524 Ptep1.0/2.0 NW_024998392.1 406 1180 + haze protective factor 1-like aug3.g15208 NA 0
17 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02