Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446929 Ptep1.0/2.0 NW_024969679.1 845659 848008 - transmembrane protein 209 aug3.g1533 LOC107446929 0
LOC107448619 Ptep1.0/2.0 NW_024969997.1 270905 287700 + uncharacterized LOC107448619 aug3.g15333 LOC107448619 0
LOC107448622 Ptep1.0/2.0 NW_024969997.1 418324 444012 - mRNA-binding protein PUF3-like aug3.g15334 LOC107448622 0
LOC107448603 Ptep1.0/2.0 NW_024969997.1 470190 509404 - uncharacterized LOC107448603 aug3.g15335 LOC107448603 0
LOC107448608 Ptep1.0/2.0 NW_024969997.1 528864 558390 - coiled-coil domain-containing protein 93 aug3.g15335 LOC107448608,LOC107442415 0
LOC107448621 Ptep1.0/2.0 NW_024969997.1 558483 589036 + chromosome partition protein Smc aug3.g15336 LOC107448621 0
LOC107448624 Ptep1.0/2.0 NW_024969997.1 590846 603987 - uncharacterized LOC107448624 aug3.g15337 LOC107448624 0
LOC107448618 Ptep1.0/2.0 NW_024969997.1 610169 635757 - uncharacterized LOC107448618 aug3.g15339,aug3.g15338 LOC107448618 0
LOC107448613 Ptep1.0/2.0 NW_024970699.1 264094 273820 + 3'-5' ssDNA/RNA exonuclease TatD aug3.g15330 LOC107448613 0
LOC107448616 Ptep1.0/2.0 NW_024971456.1 448 60042 - neural cell adhesion molecule 2 aug3.g15332 LOC107448616 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02