Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448891 Ptep1.0/2.0 NW_024969612.1 2892384 2899314 - uncharacterized LOC107448891 aug3.g15359 LOC107448891 0
LOC107448910 Ptep1.0/2.0 NW_024969612.1 2906376 2919472 + BTB/POZ domain-containing protein 2 aug3.g15358 LOC107448910 0
LOC107448902 Ptep1.0/2.0 NW_024969612.1 2929461 2951410 - cytosolic Fe-S cluster assembly factor NUBP2 homolog aug3.g15357 LOC107448902 0
LOC107448903 Ptep1.0/2.0 NW_024969612.1 2951955 2957922 + methylmalonyl-CoA epimerase, mitochondrial aug3.g15356 LOC107448903 0
LOC107448908 Ptep1.0/2.0 NW_024969612.1 2967690 2981085 + acidic leucine-rich nuclear phosphoprotein 32 family member A aug3.g15355 LOC107448908 0
LOC107448900 Ptep1.0/2.0 NW_024969612.1 2988330 3018255 + V-type proton ATPase 116 kDa subunit a1 aug3.g15353 LOC107448900 0
LOC107448901 Ptep1.0/2.0 NW_024969960.1 28787 57222 + S-adenosylmethionine decarboxylase proenzyme aug3.g15351,aug3.g15350,aug3.g15352 LOC107448901 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02