Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448894 Ptep1.0/2.0 NW_024969663.1 24014 35954 - beta-1,4-glucuronyltransferase 1 aug3.g15370 LOC107448894 0
LOC107448896 Ptep1.0/2.0 NW_024969663.1 36070 56185 + uncharacterized LOC107448896 aug3.g15371 LOC107448896 0
LOC107448898 Ptep1.0/2.0 NW_024969663.1 67930 85929 - integrator complex subunit 14 aug3.g15373 LOC107448898 0
LOC107448897 Ptep1.0/2.0 NW_024969663.1 86016 130931 + FRAS1-related extracellular matrix protein 1 aug3.g15374 LOC107448897 0
LOC107448892 Ptep1.0/2.0 NW_024969663.1 143161 260710 + laminin subunit alpha aug3.g15376 LOC107448892 0
LOC107448882 Ptep1.0/2.0 NW_024969663.1 265720 319943 - tuftelin-interacting protein 11 aug3.g15377 LOC107448882 0
LOC107446916 Ptep1.0/2.0 NW_024969679.1 707911 749326 + insulin receptor substrate 1-B aug3.g1537 LOC107446916 0
LOC122270022 Ptep1.0/2.0 NW_024970016.1 202004 206020 + pseudogene aug3.g15372 NA 2e-92
LOC122270644 Ptep1.0/2.0 NW_024970297.1 72917 73711 + uncharacterized LOC122270644 aug3.g11600,aug3.g15379,aug3.g5121 NA 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02