Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446932 Ptep1.0/2.0 NW_024969679.1 663396 669812 - 8.6 kDa transglutaminase substrate aug3.g1540 LOC107446932 0
LOC107449162 Ptep1.0/2.0 NW_024969689.1 1529957 1533468 + uncharacterized LOC107449162 aug3.g15401 LOC107449162 0
LOC107449170 Ptep1.0/2.0 NW_024969689.1 1536004 1574887 - urease subunit alpha aug3.g15402 LOC107449170,LOC107438915 0
LOC107449158 Ptep1.0/2.0 NW_024969689.1 1581958 1642269 - urease subunit alpha aug3.g15403,aug3.g17731 LOC107449158,LOC107444260,LOC107444259 0
LOC122270495 Ptep1.0/2.0 NW_024970210.1 250991 252578 - uncharacterized LOC122270495 aug3.g13236,aug3.g15409,aug3.g12705,aug3.g17624,aug3.g16436,aug3.g25831 NA 0
LOC107449159 Ptep1.0/2.0 NW_024970451.1 203365 210880 - rhodopsin, GQ-coupled-like aug3.g15404 LOC107449159 0
LOC107449173 Ptep1.0/2.0 NW_024970451.1 244540 283405 - uncharacterized LOC107449173 aug3.g15405 LOC107449173 0
LOC107449168 Ptep1.0/2.0 NW_024970451.1 292003 322363 + gastric triacylglycerol lipase aug3.g15406 LOC107449168 0
LOC107449161 Ptep1.0/2.0 NW_024971119.1 8300 121395 - acetyl-CoA carboxylase aug3.g15407 LOC107449161 0
LOC107441062 Ptep1.0/2.0 NW_024972957.1 2298 17765 - urease aug3.g14982,aug3.g17730,aug3.g15403 LOC107441062 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02