Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446820 Ptep1.0/2.0 NW_024969601.1 1533281 1677948 - glutamate receptor ionotropic, kainate 2 aug3.g1473,aug3.g15743 LOC107446820 0
LOC107446265 Ptep1.0/2.0 NW_024969609.1 7978 314412 - nesprin-1 aug3.g1291,aug3.g1289,aug3.g24162,aug3.g24562,aug3.g1292,aug3.g24179,aug3.g15792 LOC107446265,LOC107441794 0
LOC107451854 Ptep1.0/2.0 NW_024969642.1 232695 383779 - neural-cadherin aug3.g15767,aug3.g6373 LOC107451854 0
LOC107451850 Ptep1.0/2.0 NW_024969642.1 387066 404392 - 15-hydroxyprostaglandin dehydrogenase [NAD(+)] aug3.g15768 LOC107451850 0
LOC107450736 Ptep1.0/2.0 NW_024969643.1 1352985 1365285 - uncharacterized LOC107450736 aug3.g15746 LOC107450736 0
LOC107449120 Ptep1.0/2.0 NW_024969648.1 2660045 2725613 - leucine-rich repeat flightless-interacting protein 2 aug3.g157 LOC107449120 0
LOC122268970 Ptep1.0/2.0 NW_024969708.1 3800530 3801106 + uncharacterized LOC122268970 aug3.g15794 NA 9e-112
LOC107441300 Ptep1.0/2.0 NW_024969726.1 285926 393538 + protein lev-9-like aug3.g15799 LOC107441300 0
LOC122269064 Ptep1.0/2.0 NW_024969726.1 402229 469372 + complement factor H-like aug3.g15799 NA 0
LOC107446988 Ptep1.0/2.0 NW_024969769.1 264439 478283 + receptor-type guanylate cyclase Gyc76C aug3.g1571 LOC107446988 0
LOC122269234 Ptep1.0/2.0 NW_024969769.1 520132 521469 - uncharacterized LOC122269234 aug3.g1573 NA 0
LOC107451708 Ptep1.0/2.0 NW_024969770.1 141163 160734 - hydroxysteroid dehydrogenase-like protein 2 aug3.g15745 LOC107451708 0
LOC107451707 Ptep1.0/2.0 NW_024969770.1 165918 174011 - balbiani ring protein 3 aug3.g15746 LOC107451707 0
LOC122269338 Ptep1.0/2.0 NW_024969791.1 272650 273021 + uncharacterized LOC122269338 aug3.g16367,aug3.g26851,aug3.g18653,aug3.g15757,aug3.g14342,aug3.g23728,aug3.g11654,aug3.g25539,aug3.g17572,aug3.g12129,aug3.g16760,aug3.g10418,aug3.g1935 NA 0
LOC107451543 Ptep1.0/2.0 NW_024969807.1 33866 38792 - piRNA biogenesis protein EXD1-like aug3.g15734,aug3.g19422 LOC107451543 0
LOC107451544 Ptep1.0/2.0 NW_024969807.1 53005 85409 + uncharacterized LOC107451544 aug3.g15735 LOC107451544 0
LOC107451546 Ptep1.0/2.0 NW_024969807.1 122498 153152 + transmembrane protein 163 aug3.g15736 LOC107451546 0
LOC107451545 Ptep1.0/2.0 NW_024969807.1 215026 765647 + calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1 aug3.g15741 LOC107451545,LOC107453169 0
LOC110283201 Ptep1.0/2.0 NW_024969807.1 790428 810109 - uncharacterized LOC110283201 aug3.g15742 LOC110283201 0
LOC107452276 Ptep1.0/2.0 NW_024969822.1 716982 718254 - uncharacterized LOC107452276 aug3.g23590,aug3.g26652,aug3.g1344,aug3.g15708 LOC107452276 0
LOC107451242 Ptep1.0/2.0 NW_024969845.1 8392 26626 - enoyl-CoA delta isomerase 2 aug3.g15704 LOC107451242 0
LOC107451240 Ptep1.0/2.0 NW_024969845.1 26588 65299 + conserved oligomeric Golgi complex subunit 4 aug3.g15703 LOC107451240 0
LOC107451248 Ptep1.0/2.0 NW_024969845.1 69320 106118 - ATP-dependent RNA helicase DDX42 aug3.g15701 LOC107451248 0
LOC107451235 Ptep1.0/2.0 NW_024969845.1 119357 147638 - ceramide glucosyltransferase aug3.g15700 LOC107451235 0
LOC107451706 Ptep1.0/2.0 NW_024969858.1 440545 460315 + DNA damage-regulated autophagy modulator protein 2 aug3.g15764 LOC107451706 0
LOC107451705 Ptep1.0/2.0 NW_024969858.1 465413 483891 + DNA damage-regulated autophagy modulator protein 1 aug3.g15763 LOC107451705 0
LOC107451710 Ptep1.0/2.0 NW_024969858.1 563893 708979 - uncharacterized LOC107451710 aug3.g15760 LOC107451710 0
LOC107451699 Ptep1.0/2.0 NW_024969858.1 924664 959883 + carnitine O-acetyltransferase aug3.g15758 LOC107451699 0
LOC107451418 Ptep1.0/2.0 NW_024969865.1 65493 162811 + cubilin aug3.g15727 LOC107451418 0
LOC107451427 Ptep1.0/2.0 NW_024969865.1 194014 209965 + glycerophosphocholine phosphodiesterase GPCPD1 aug3.g15726 LOC107451427 0
LOC122269578 Ptep1.0/2.0 NW_024969865.1 212981 222743 + glycerophosphocholine phosphodiesterase GPCPD1-like aug3.g15726 LOC107451427 0
LOC107451428 Ptep1.0/2.0 NW_024969865.1 227714 239974 - putative GPI-anchor transamidase aug3.g15725 LOC107451428 0
LOC107451426 Ptep1.0/2.0 NW_024969865.1 247787 313818 + uncharacterized LOC107451426 aug3.g15724 LOC107451426 0
LOC107451419 Ptep1.0/2.0 NW_024969865.1 396503 432132 - aromatic-L-amino-acid decarboxylase aug3.g15722 LOC107451419 0
LOC107451431 Ptep1.0/2.0 NW_024969865.1 451343 455371 + peroxisomal biogenesis factor 3 aug3.g15721 LOC107451431 0
LOC107451417 Ptep1.0/2.0 NW_024969865.1 463768 466446 - uncharacterized LOC107451417 aug3.g15720 LOC107451417 0
LOC107451416 Ptep1.0/2.0 NW_024969865.1 471233 473957 - uncharacterized LOC107451416 aug3.g15719 LOC107451416 0
LOC107451415 Ptep1.0/2.0 NW_024969865.1 477297 495823 + glutamate receptor ionotropic, delta-2-like aug3.g15718 LOC107451415 0
LOC107451420 Ptep1.0/2.0 NW_024969865.1 505283 527139 - glutamate receptor ionotropic, delta-1-like aug3.g15717 LOC107451420 0
LOC107451423 Ptep1.0/2.0 NW_024969865.1 530797 648333 + hemicentin-1 aug3.g15713,aug3.g23075 LOC107451424,LOC107451423,LOC107437848 0
LOC107451425 Ptep1.0/2.0 NW_024969865.1 542615 545387 + LON peptidase N-terminal domain and RING finger protein 3-like aug3.g15714 LOC107451425 0
LOC122268343 Ptep1.0/2.0 NW_024969865.1 649321 659051 + hemicentin-1-like aug3.g15713 LOC107451423 0
LOC107451429 Ptep1.0/2.0 NW_024969865.1 662660 673237 - 5'-3' exoribonuclease 1 aug3.g15712 LOC107451429 0
LOC107451432 Ptep1.0/2.0 NW_024969865.1 673506 688520 + heparan sulfate 2-O-sulfotransferase 1 aug3.g15710,aug3.g15711 LOC107451432 0
LOC107451421 Ptep1.0/2.0 NW_024969865.1 694855 749769 - influenza virus NS1A-binding protein homolog aug3.g15710 LOC107451421 0
LOC107441285 Ptep1.0/2.0 NW_024969922.1 563269 564594 - uncharacterized LOC107441285 aug3.g15781 LOC107441285 7e-136
LOC107441284 Ptep1.0/2.0 NW_024969922.1 564696 588320 + ion channel TACAN aug3.g15780 LOC107441284 0
LOC107441283 Ptep1.0/2.0 NW_024969922.1 591675 610748 - protein spinster homolog 1 aug3.g15779 LOC107441283 0
LOC107441282 Ptep1.0/2.0 NW_024969922.1 610928 716356 + neurofibromin aug3.g15778 LOC107441282 0
LOC107441278 Ptep1.0/2.0 NW_024969922.1 718747 742892 - mitochondrial ubiquitin ligase activator of NFKB 1 aug3.g15777 LOC107441278 0
LOC107441280 Ptep1.0/2.0 NW_024969922.1 729599 738699 + nudix hydrolase 8-like aug3.g15776 LOC107441280 0
LOC107441289 Ptep1.0/2.0 NW_024969922.1 748499 765848 + serine/threonine-protein kinase 24 aug3.g15775 LOC107441289 0
LOC122269818 Ptep1.0/2.0 NW_024969944.1 2316 4848 - 15-hydroxyprostaglandin dehydrogenase [NAD(+)]-like aug3.g15768 LOC107451850 0
LOC107451845 Ptep1.0/2.0 NW_024969944.1 24763 55590 - transcription initiation factor TFIID subunit 4-like aug3.g15770,aug3.g15769 LOC107451845 0
LOC107451855 Ptep1.0/2.0 NW_024969944.1 55846 76043 + mediator of RNA polymerase II transcription subunit 11 aug3.g15771 LOC107451855 0
LOC107451847 Ptep1.0/2.0 NW_024969944.1 424545 556068 + uncharacterized LOC107451847 aug3.g15772 LOC107451847 0
LOC107449560 Ptep1.0/2.0 NW_024969949.1 174485 183679 + balbiani ring protein 3-like aug3.g2826,aug3.g15746 LOC107449560 0
LOC107438781 Ptep1.0/2.0 NW_024969956.1 651005 651502 + uncharacterized LOC107438781 aug3.g1573 LOC107438781 1e-179
LOC107441683 Ptep1.0/2.0 NW_024969976.1 257548 304896 - cytochrome P450 3A25 aug3.g15754,aug3.g27390,aug3.g15753 LOC107441683,LOC107441684 0
LOC122270037 Ptep1.0/2.0 NW_024970025.1 997369 1000380 + uncharacterized LOC122270037 aug3.g24058,aug3.g25931,aug3.g3724,aug3.g15747 NA 0
LOC107451709 Ptep1.0/2.0 NW_024970096.1 88201 156422 - glutamate receptor ionotropic, kainate 2 aug3.g15748 LOC107451709 0
LOC107451703 Ptep1.0/2.0 NW_024970096.1 376922 416597 + cytochrome P450 3A25 aug3.g15753 LOC107451703 0
LOC107451704 Ptep1.0/2.0 NW_024970096.1 429126 441560 + glycine receptor subunit alpha-2-like aug3.g15754 LOC107451704 0
LOC107451702 Ptep1.0/2.0 NW_024970096.1 446917 488977 + cytochrome P450 3A25 aug3.g15754 LOC107451702 0
LOC107451701 Ptep1.0/2.0 NW_024970096.1 525783 569433 + protein sidekick aug3.g15755 LOC107451701 0
LOC107451698 Ptep1.0/2.0 NW_024970096.1 586684 588248 + SCAN domain-containing protein 3 aug3.g15756,aug3.g5205,aug3.g20273,aug3.g17361,aug3.g425,aug3.g22989,aug3.g14570,aug3.g23361 LOC107451698 0
LOC122270210 Ptep1.0/2.0 NW_024970096.1 609796 610133 + uncharacterized LOC122270210 aug3.g15757 NA 5e-177
LOC122270368 Ptep1.0/2.0 NW_024970151.1 20933 24665 + SCAN domain-containing protein 3-like aug3.g15756 NA 0
LOC122270455 Ptep1.0/2.0 NW_024970189.1 135042 136541 - SCAN domain-containing protein 3-like aug3.g15756 NA 0
LOC107446987 Ptep1.0/2.0 NW_024970343.1 60817 193526 + DDB1- and CUL4-associated factor 1 aug3.g1575 LOC107446987 0
LOC107446984 Ptep1.0/2.0 NW_024970343.1 219448 272984 + glycine receptor subunit alpha-2 aug3.g1576 LOC107446984 0
LOC107446986 Ptep1.0/2.0 NW_024970343.1 296813 406522 - major facilitator superfamily domain-containing protein 4A aug3.g1578 LOC107446986 0
LOC107451433 Ptep1.0/2.0 NW_024970363.1 51655 52715 + peroxiredoxin-2-like aug3.g15709 LOC107451433 0
LOC107441293 Ptep1.0/2.0 NW_024970418.1 29251 63008 - probable RNA-dependent RNA polymerase 2 aug3.g19679,aug3.g20207,aug3.g19678,aug3.g19588,aug3.g15791 LOC107441293 0
LOC107441292 Ptep1.0/2.0 NW_024970418.1 71409 84499 - protein artichoke aug3.g15790,aug3.g17509 LOC107441292 0
LOC107441291 Ptep1.0/2.0 NW_024970418.1 86861 103627 - connectin aug3.g15789 LOC107441291 0
LOC107451332 Ptep1.0/2.0 NW_024970574.1 30477 76012 + uncharacterized LOC107451332 aug3.g3963,aug3.g15729 LOC110283199,LOC107451332 0
LOC107449465 Ptep1.0/2.0 NW_024970633.1 184365 195472 + sulfotransferase ssu-1-like aug3.g2793,aug3.g2795,aug3.g15732 LOC107449465 0
LOC107451549 Ptep1.0/2.0 NW_024970633.1 264304 269523 + sulfotransferase ssu-1 aug3.g15732 LOC107451549 0
LOC107451548 Ptep1.0/2.0 NW_024970633.1 297942 325409 - DNA repair protein XRCC1 aug3.g15731 LOC107451548 0
LOC107441296 Ptep1.0/2.0 NW_024970675.1 7109 60947 + abnormal spindle-like microcephaly-associated protein homolog aug3.g15794 LOC107441296 0
LOC107441297 Ptep1.0/2.0 NW_024970675.1 63062 102138 - ubiquitin conjugation factor E4 A aug3.g15795 LOC107441297 0
LOC107441298 Ptep1.0/2.0 NW_024970675.1 109557 115879 - beta-1,4-mannosyltransferase egh aug3.g15796 LOC107441298 0
LOC107441299 Ptep1.0/2.0 NW_024970675.1 159827 244133 + zinc metalloproteinase-disintegrin-like MTP8 aug3.g15798 LOC107441299 0
LOC107456085 Ptep1.0/2.0 NW_024970745.1 184298 240590 + uncharacterized LOC107456085 aug3.g8287,aug3.g9302,aug3.g17994,aug3.g26275,aug3.g18348,aug3.g24123,aug3.g8286,aug3.g11028,aug3.g25894,aug3.g10432,aug3.g27258,aug3.g15751,aug3.g2427 LOC107456085 0
LOC107441287 Ptep1.0/2.0 NW_024970899.1 139966 155194 + cytochrome P450 10 aug3.g15786 LOC107441287 0
LOC107446839 Ptep1.0/2.0 NW_024971051.1 68623 98384 + cell division cycle protein 16 homolog aug3.g19430,aug3.g15774 LOC107446839 0
LOC122271728 Ptep1.0/2.0 NW_024971102.1 128170 133467 - pseudogene aug3.g15757 NA 6e-33
LOC122268400 Ptep1.0/2.0 NW_024971179.1 157728 159590 + SCAN domain-containing protein 3-like aug3.g15756,aug3.g18180,aug3.g1799,aug3.g17360 NA 0
LOC122272248 Ptep1.0/2.0 NW_024971693.1 10866 26744 - uncharacterized LOC122272248 aug3.g15778,aug3.g17050 NA 6e-167
LOC107440591 Ptep1.0/2.0 NW_024971693.1 30627 35234 - neurofibromin-like aug3.g27101,aug3.g15778 LOC107440591 0
LOC107453955 Ptep1.0/2.0 NW_024971832.1 43929 46604 - uncharacterized LOC107453955 aug3.g5901,aug3.g15467,aug3.g10692,aug3.g15461,aug3.g1579 LOC107453955 0
LOC122272368 Ptep1.0/2.0 NW_024971867.1 726 6033 - GPI-anchor transamidase-like aug3.g15725 LOC107451428 0
LOC122268315 Ptep1.0/2.0 NW_024971989.1 6197 29106 + pseudogene aug3.g24093,aug3.g19007,aug3.g15744,aug3.g11997,aug3.g24247,aug3.g10254,aug3.g24212,aug3.g9814 NA 0
LOC122272769 Ptep1.0/2.0 NW_024972776.1 135074 136936 + SCAN domain-containing protein 3-like aug3.g15756 NA 0
LOC122273086 Ptep1.0/2.0 NW_024974042.1 1418 6180 - uncharacterized LOC122273086 aug3.g15718 LOC107451415 0
LOC107449495 Ptep1.0/2.0 NW_024975051.1 3361 5634 - piRNA biogenesis protein EXD1-like aug3.g15445,aug3.g15734 LOC107449495 0
LOC122273361 Ptep1.0/2.0 NW_024975651.1 551 4681 + neurofibromin-like aug3.g15778 NA 0
LOC107446983 Ptep1.0/2.0 NW_024978016.1 2247 3750 - uncharacterized LOC107446983 aug3.g1573,aug3.g13370,aug3.g23825 LOC107446983 0
LOC122273935 Ptep1.0/2.0 NW_024983878.1 19 648 - SCAN domain-containing protein 3-like aug3.g15756 NA 3e-172
LOC122274095 Ptep1.0/2.0 NW_024991803.1 349 1408 - uncharacterized LOC122274095 aug3.g7024,aug3.g14222,aug3.g12845,aug3.g15728,aug3.g24559,aug3.g5964,aug3.g23517 NA 0
101 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02