Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122271667 Ptep1.0/2.0 NW_024969597.1 1772516 1773553 - uncharacterized LOC122271667 aug3.g15976 NA 0
LOC107441435 Ptep1.0/2.0 NW_024969630.1 499431 503461 + cytochrome b-c1 complex subunit 8 aug3.g15900 LOC107441435 0
LOC107441431 Ptep1.0/2.0 NW_024969630.1 503910 511339 - NTF2-related export protein 2 aug3.g15901 LOC107441431 0
LOC107441436 Ptep1.0/2.0 NW_024969630.1 522425 568488 - transient receptor potential cation channel subfamily A member 1 homolog aug3.g15905 LOC107441436 0
LOC107441432 Ptep1.0/2.0 NW_024969630.1 637407 706595 - delta-sarcoglycan aug3.g15906 LOC107441432 0
LOC122271561 Ptep1.0/2.0 NW_024969642.1 1563607 1564386 + general transcription factor II-I repeat domain-containing protein 2-like aug3.g15950 NA 0
LOC107449145 Ptep1.0/2.0 NW_024969648.1 2539642 2567440 + protein phosphatase 1 regulatory subunit 37 aug3.g159 LOC107449145 0
LOC107441442 Ptep1.0/2.0 NW_024969663.1 994466 1016125 + vesicle-associated membrane protein-associated protein A aug3.g15907,aug3.g20546 LOC107441442 0
LOC107441437 Ptep1.0/2.0 NW_024969663.1 1020383 1041636 - protein CFAP20DC aug3.g15908 LOC107441437 0
LOC107441444 Ptep1.0/2.0 NW_024969663.1 1041748 1056418 + 39S ribosomal protein L2, mitochondrial aug3.g15909 LOC107441444 0
LOC107441438 Ptep1.0/2.0 NW_024969663.1 1056506 1089109 - sorting nexin-5 aug3.g15910 LOC107441438 0
LOC107441445 Ptep1.0/2.0 NW_024969663.1 1099163 1117777 - programmed cell death protein 6 aug3.g15911 LOC107441445 0
LOC107441439 Ptep1.0/2.0 NW_024969663.1 1127043 1137157 + phosphoserine phosphatase-like aug3.g15912 LOC107441439 0
LOC107447089 Ptep1.0/2.0 NW_024969668.1 890798 958177 - synaptotagmin-15 aug3.g1598 LOC107447089 0
LOC107447096 Ptep1.0/2.0 NW_024969668.1 1001328 1021418 + nipped-B-like protein aug3.g1596 LOC107447096 0
LOC107447097 Ptep1.0/2.0 NW_024969668.1 1001679 1012633 + PITH domain-containing protein 1 aug3.g1597 LOC107447097 0
LOC107448363 Ptep1.0/2.0 NW_024969668.1 1036707 1080188 + anoctamin-5 aug3.g20243,aug3.g1595 LOC107448363,LOC107447093 0
LOC107441591 Ptep1.0/2.0 NW_024969707.1 51434 479065 + follistatin-related protein 5 aug3.g15993 LOC107441591 0
LOC107441590 Ptep1.0/2.0 NW_024969707.1 486692 624868 - rap guanine nucleotide exchange factor 2 aug3.g15992 LOC107441590 0
LOC107447051 Ptep1.0/2.0 NW_024969723.1 1073753 1098525 + beta-alanine transporter aug3.g1591 LOC107447051 0
LOC122268329 Ptep1.0/2.0 NW_024969723.1 1146622 1154401 - glycine receptor subunit alpha-2-like aug3.g1592 LOC107447053 0
LOC107444110 Ptep1.0/2.0 NW_024969740.1 36490 37140 + uncharacterized LOC107444110 aug3.g17632,aug3.g15930,aug3.g14568 LOC107444110 0
LOC107441492 Ptep1.0/2.0 NW_024969756.1 592681 610680 + POU domain, class 3, transcription factor 4 aug3.g15946 LOC107441492 0
LOC107441488 Ptep1.0/2.0 NW_024969781.1 1155774 1160755 - uncharacterized LOC107441488 aug3.g15941,aug3.g13205 LOC107441488 0
LOC107441560 Ptep1.0/2.0 NW_024969785.1 903124 932910 + negative elongation factor A aug3.g15984,aug3.g15985 LOC107441560 0
LOC107441561 Ptep1.0/2.0 NW_024969785.1 958551 1030082 + homeobox protein Hox-C10-like aug3.g15983 LOC107441561 0
LOC107441558 Ptep1.0/2.0 NW_024969785.1 1052381 1062000 - putative uncharacterized protein YGR160W aug3.g15982 LOC107441558 0
LOC107441559 Ptep1.0/2.0 NW_024969785.1 1067054 1081790 - uncharacterized LOC107441559 aug3.g15981 LOC107441559 0
LOC107438137 Ptep1.0/2.0 NW_024969793.1 699616 824568 + formin-J-like aug3.g26411,aug3.g15945,aug3.g16965,aug3.g18789,aug3.g3845,aug3.g20638,aug3.g27431,aug3.g11569,aug3.g26749,aug3.g13556,aug3.g568,aug3.g15812,aug3.g22828,aug3.g12149,aug3.g5637,aug3.g892,aug3.g8296,aug3.g18962,aug3.g6082,aug3.g24558,aug3.g9808,aug3.g2790,a LOC107438137 0
LOC107441496 Ptep1.0/2.0 NW_024969857.1 944114 993579 - barH-like 2 homeobox protein aug3.g15951 LOC107441496 0
LOC107454055 Ptep1.0/2.0 NW_024969902.1 212923 222997 - BTB/POZ domain-containing protein At2g30600 aug3.g23948,aug3.g23925,aug3.g15988 LOC107454055 0
LOC107441730 Ptep1.0/2.0 NW_024969905.1 53494 56422 + zinc finger protein 271-like aug3.g9864,aug3.g15975 LOC107441730 0
LOC107451505 Ptep1.0/2.0 NW_024969916.1 781620 784069 + uncharacterized protein K02A2.6-like aug3.g4071,aug3.g15980 LOC107451505 0
LOC107441805 Ptep1.0/2.0 NW_024969929.1 811784 830025 - uncharacterized LOC107441805 aug3.g16153,aug3.g15942 LOC107441805 0
LOC107455773 Ptep1.0/2.0 NW_024969995.1 288706 311602 - keratin, type I cytoskeletal 10-like aug3.g15927,aug3.g15928 LOC107455773 0
LOC107455051 Ptep1.0/2.0 NW_024969995.1 320297 354230 - translation initiation factor IF-2-like aug3.g15926,aug3.g22249 LOC107455051 0
LOC107441456 Ptep1.0/2.0 NW_024969995.1 357117 380574 - basic salivary proline-rich protein 2 aug3.g15926 LOC107441456 0
LOC107450364 Ptep1.0/2.0 NW_024969995.1 382660 397875 - uncharacterized LOC107450364 aug3.g21168,aug3.g15925 LOC107450364 0
LOC107441595 Ptep1.0/2.0 NW_024970063.1 170231 194090 - elongator complex protein 3 aug3.g15995 LOC107441595 0
LOC107441594 Ptep1.0/2.0 NW_024970063.1 199538 264011 + uncharacterized LOC107441594 aug3.g15994 LOC107441594 0
LOC107449728 Ptep1.0/2.0 NW_024970105.1 732 21496 + uncharacterized transmembrane protein DDB_G0289901-like aug3.g15970 LOC107449728 0
LOC107441548 Ptep1.0/2.0 NW_024970105.1 32635 43175 - uncharacterized LOC107441548 aug3.g15969 LOC107441548 0
LOC107441546 Ptep1.0/2.0 NW_024970105.1 51588 61528 + all trans-polyprenyl-diphosphate synthase PDSS2-like aug3.g15968 LOC107441546 0
LOC107441550 Ptep1.0/2.0 NW_024970105.1 61964 75893 - all trans-polyprenyl-diphosphate synthase PDSS2 aug3.g15967 LOC107441550 0
LOC107441545 Ptep1.0/2.0 NW_024970105.1 80434 185753 - agrin aug3.g15966 LOC107441545 0
LOC122270272 Ptep1.0/2.0 NW_024970112.1 1216674 1217867 - uncharacterized LOC122270272 aug3.g6276,aug3.g8786,aug3.g14191,aug3.g22774,aug3.g7314,aug3.g20021,aug3.g19342,aug3.g20731,aug3.g21771,aug3.g5270,aug3.g15965,aug3.g8785 NA 0
LOC107436885 Ptep1.0/2.0 NW_024970215.1 67424 142068 + prodigiosin synthesizing transferase PigC aug3.g11904,aug3.g14154,aug3.g14155,aug3.g15937,aug3.g18169 LOC107436885 0
LOC110282456 Ptep1.0/2.0 NW_024970217.1 441081 444396 + piggyBac transposable element-derived protein 3 aug3.g15955 LOC110282456 3e-49
LOC107436667 Ptep1.0/2.0 NW_024970223.1 102 956 + ATP-dependent DNA helicase PIF2-like aug3.g11752,aug3.g15976,aug3.g7940 LOC107436667 0
LOC107449470 Ptep1.0/2.0 NW_024970438.1 7332 11258 - uncharacterized LOC107449470 aug3.g6431,aug3.g14252,aug3.g15024,aug3.g9027,aug3.g25356,aug3.g18696,aug3.g5452,aug3.g19414,aug3.g15953,aug3.g15952 LOC107449470 0
LOC122271071 Ptep1.0/2.0 NW_024970534.1 25774 46243 + uncharacterized LOC122271071 aug3.g15944 NA 0
LOC107439953 Ptep1.0/2.0 NW_024970656.1 327491 362579 + uncharacterized LOC107439953 aug3.g14154,aug3.g15938,aug3.g21320,aug3.g13630 LOC107439953 0
LOC107441554 Ptep1.0/2.0 NW_024970664.1 43023 73473 - RYamide receptor-like aug3.g9503,aug3.g15977 LOC107441554 0
LOC107441500 Ptep1.0/2.0 NW_024970878.1 93988 109396 + probable small nuclear ribonucleoprotein F aug3.g15958 LOC107441500 0
LOC122271508 Ptep1.0/2.0 NW_024970890.1 2899 3460 + uncharacterized LOC122271508 aug3.g15989 NA 0
LOC107441562 Ptep1.0/2.0 NW_024970968.1 172777 179644 - 1,5-anhydro-D-fructose reductase-like aug3.g15986 LOC107441562 4e-92
LOC110283536 Ptep1.0/2.0 NW_024971058.1 4206 7762 - uncharacterized LOC110283536 aug3.g14382,aug3.g15913,aug3.g14383,aug3.g15914 LOC110283536 0
LOC107441460 Ptep1.0/2.0 NW_024971108.1 13208 36588 + trimeric intracellular cation channel type 1B.1 aug3.g15931 LOC107441460 0
LOC107441461 Ptep1.0/2.0 NW_024971108.1 56034 85579 - probable very-long-chain enoyl-CoA reductase art-1 aug3.g15932 LOC107441461 0
LOC107441462 Ptep1.0/2.0 NW_024971108.1 90961 92049 - uncharacterized LOC107441462 aug3.g12062,aug3.g15933 LOC107441462 0
LOC107441451 Ptep1.0/2.0 NW_024971185.1 119642 157333 - uncharacterized LOC107441451 aug3.g15924 LOC107441451 0
LOC122268401 Ptep1.0/2.0 NW_024971185.1 164115 190840 - receptor-type tyrosine-protein phosphatase mu-like aug3.g15923 LOC107441452 0
LOC122268269 Ptep1.0/2.0 NW_024971233.1 1644 15704 - uncharacterized LOC122268269 aug3.g15942 NA 0
LOC107447053 Ptep1.0/2.0 NW_024971275.1 161 20709 - gamma-aminobutyric acid receptor subunit delta aug3.g1592 LOC107447053 0
LOC107447068 Ptep1.0/2.0 NW_024971275.1 27855 58423 - short-chain dehydrogenase/reductase family 16C member 6 aug3.g1593 LOC107447068 0
LOC107447063 Ptep1.0/2.0 NW_024971275.1 60895 99862 + probable helicase with zinc finger domain aug3.g1594 LOC107447063 0
LOC122272042 Ptep1.0/2.0 NW_024971432.1 907 10425 + uncharacterized LOC122272042 aug3.g15973 NA 0
LOC122272114 Ptep1.0/2.0 NW_024971507.1 74598 77665 - uncharacterized LOC122272114 aug3.g15989 NA 0
LOC107446642 Ptep1.0/2.0 NW_024971589.1 4902 15334 + exonuclease 1 aug3.g19327,aug3.g15961 LOC107446642 0
LOC107444890 Ptep1.0/2.0 NW_024971611.1 1063 46649 + putative phosphoenolpyruvate synthase aug3.g14154,aug3.g15939 LOC107444890 0
LOC122272191 Ptep1.0/2.0 NW_024971611.1 55278 65889 + uncharacterized LOC122272191 aug3.g15938 NA 0
LOC122272218 Ptep1.0/2.0 NW_024971645.1 45564 49030 + pseudogene aug3.g15999 NA 0
LOC107441463 Ptep1.0/2.0 NW_024971650.1 886 8810 - putative phosphoenolpyruvate synthase aug3.g15937 LOC107441463 0
LOC107441552 Ptep1.0/2.0 NW_024971698.1 633 54876 - twinkle protein, mitochondrial aug3.g15971 LOC107441552 0
LOC107441553 Ptep1.0/2.0 NW_024971698.1 55009 57492 + uncharacterized LOC107441553 aug3.g15972 LOC107441553 0
LOC107441597 Ptep1.0/2.0 NW_024971738.1 11422 23291 + calcium and integrin-binding protein 1-like aug3.g7568,aug3.g15996 LOC107441597 0
LOC122272307 Ptep1.0/2.0 NW_024971761.1 36442 37869 - uncharacterized LOC122272307 aug3.g15961,aug3.g11714 NA 0
LOC122272327 Ptep1.0/2.0 NW_024971799.1 22327 48429 - uncharacterized LOC122272327 aug3.g15947 NA 1e-121
LOC122272350 Ptep1.0/2.0 NW_024971841.1 4037 47887 - uncharacterized LOC122272350 aug3.g15961,aug3.g21957 NA 0
LOC110282418 Ptep1.0/2.0 NW_024971846.1 39083 41378 + uncharacterized LOC110282418 aug3.g23460,aug3.g10334,aug3.g15955 LOC110282418 0
LOC107443936 Ptep1.0/2.0 NW_024971848.1 872 44489 + uncharacterized phosphotransferase YvkC-like aug3.g15994,aug3.g21652,aug3.g24498 LOC107443936,LOC107452030 0
LOC122272411 Ptep1.0/2.0 NW_024971963.1 47733 48912 + uncharacterized LOC122272411 aug3.g15919 NA 4e-145
LOC107441452 Ptep1.0/2.0 NW_024971975.1 18451 43689 + receptor-type tyrosine-protein phosphatase T aug3.g15923,aug3.g15556 LOC107441452 0
LOC122272490 Ptep1.0/2.0 NW_024972107.1 28236 35424 - uncharacterized phosphotransferase YvkC-like aug3.g15994 NA 6e-121
LOC122272507 Ptep1.0/2.0 NW_024972143.1 909 29294 - disheveled-associated activator of morphogenesis 1-A-like aug3.g8608,aug3.g15978 NA 6e-98
LOC107441589 Ptep1.0/2.0 NW_024972157.1 13661 31634 - inner kinetochore subunit cnp3 aug3.g15990 LOC107441589 0
LOC122272542 Ptep1.0/2.0 NW_024972204.1 7412 8321 + ATP-dependent DNA helicase pif1-like aug3.g15976 NA 0
LOC122268427 Ptep1.0/2.0 NW_024972276.1 8007 28029 + nephrin-like aug3.g15961 NA 0
LOC122272621 Ptep1.0/2.0 NW_024972373.1 9171 9536 - zinc finger BED domain-containing protein 5-like aug3.g15950 NA 4e-154
LOC122272670 Ptep1.0/2.0 NW_024972498.1 7582 9699 - ATP-dependent DNA helicase pif1-like aug3.g15976 NA 0
LOC107453002 Ptep1.0/2.0 NW_024972607.1 13951 26729 + aldose reductase-related protein 2-like aug3.g15987 LOC107453002 0
LOC107447942 Ptep1.0/2.0 NW_024972696.1 3893 20166 - aldo-keto reductase family 1 member A1 aug3.g15987 LOC107447942 0
LOC122272892 Ptep1.0/2.0 NW_024973224.1 3354 8886 + uncharacterized LOC122272892 aug3.g15961 NA 0
LOC107441455 Ptep1.0/2.0 NW_024973759.1 1563 7864 + merozoite surface antigen 2, allelic form 2-like aug3.g15929,aug3.g15927,aug3.g8012 LOC107441455 0
LOC107441381 Ptep1.0/2.0 NW_024973794.1 2135 3103 + uncharacterized LOC107441381 aug3.g15868,aug3.g15979 LOC107441381 0
LOC122273031 Ptep1.0/2.0 NW_024973802.1 1124 8475 + RING finger protein 10-like aug3.g15978 NA 0
LOC107437295 Ptep1.0/2.0 NW_024974061.1 191 2551 + uncharacterized LOC107437295 aug3.g15941,aug3.g14499,aug3.g4640,aug3.g15940,aug3.g25376 LOC107437295 0
LOC107440577 Ptep1.0/2.0 NW_024974975.1 439 5219 - all trans-polyprenyl-diphosphate synthase PDSS2 aug3.g15968,aug3.g23385 LOC107440577 0
LOC122273285 Ptep1.0/2.0 NW_024975186.1 3361 3928 - uncharacterized LOC122273285 aug3.g15980 NA 7e-128
LOC122273286 Ptep1.0/2.0 NW_024975186.1 4370 5061 - uncharacterized LOC122273286 aug3.g15980 NA 0
LOC122273375 Ptep1.0/2.0 NW_024975711.1 4727 5554 + uncharacterized LOC122273375 aug3.g15979 NA 0
LOC122273430 Ptep1.0/2.0 NW_024976054.1 3199 4629 - uncharacterized LOC122273430 aug3.g15940 NA 0
LOC122273493 Ptep1.0/2.0 NW_024976621.1 931 3055 + agrin-like aug3.g15966 NA 3e-179
LOC122273561 Ptep1.0/2.0 NW_024977213.1 28 3960 - uncharacterized LOC122273561 aug3.g15994 NA 3e-108
LOC122273678 Ptep1.0/2.0 NW_024978472.1 5484 6165 + uncharacterized LOC122273678 aug3.g15904 NA 7e-142
LOC122273851 Ptep1.0/2.0 NW_024981685.1 247 722 + uncharacterized LOC122273851 aug3.g15999 NA 6e-19
LOC122273908 Ptep1.0/2.0 NW_024983102.1 1881 2208 + uncharacterized LOC122273908 aug3.g15937 NA 2e-115
LOC122274019 Ptep1.0/2.0 NW_024987195.1 944 1369 - histone-lysine N-methyltransferase SETMAR-like aug3.g15975 NA 0
LOC122268482 Ptep1.0/2.0 NW_024994181.1 360 1316 + uncharacterized LOC122268482 aug3.g15989 NA 0
LOC122268619 Ptep1.0/2.0 NW_025007876.1 353 891 + uncharacterized LOC122268619 aug3.g15979 NA 0
110 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02