Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107441756 Ptep1.0/2.0 NW_024969616.1 2784695 2799532 - uncharacterized LOC107441756 aug3.g16090 LOC107441756 0
LOC107441755 Ptep1.0/2.0 NW_024969616.1 2815054 2834586 + cholesterol 7-desaturase nvd aug3.g16091 LOC107441755 0
LOC107441757 Ptep1.0/2.0 NW_024969616.1 2843714 2854270 + uncharacterized LOC107441757 aug3.g16092 LOC107441757 2e-65
LOC107450214 Ptep1.0/2.0 NW_024969616.1 2882704 2910087 + cyclin-dependent kinase 8 aug3.g21134,aug3.g16093 LOC107441759,LOC107450214 0
LOC107447113 Ptep1.0/2.0 NW_024969668.1 325298 344826 + G-protein coupled receptor moody aug3.g1609 LOC107447113 0
LOC107441767 Ptep1.0/2.0 NW_024969726.1 789614 796181 - casein kinase II subunit beta aug3.g16099,aug3.g16098 LOC107441767 0
LOC107441768 Ptep1.0/2.0 NW_024969726.1 796120 805352 + DNA polymerase epsilon subunit 3 aug3.g16097 LOC107441768 0
LOC107441758 Ptep1.0/2.0 NW_024973800.1 3759 8874 - uncharacterized LOC107441758 aug3.g16092 LOC107441758 2e-76
LOC122273078 Ptep1.0/2.0 NW_024974003.1 1 7215 - uncharacterized LOC122273078 aug3.g16091 LOC107441755 4e-109
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02