Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107441908 Ptep1.0/2.0 NW_024969743.1 861594 1040110 + ATP-binding cassette sub-family A member 7 aug3.g5931,aug3.g16251 LOC107441908 0
LOC107441913 Ptep1.0/2.0 NW_024969743.1 1044199 1065669 - meiotic recombination protein DMC1/LIM15 homolog aug3.g16252 LOC107441913 0
LOC107441912 Ptep1.0/2.0 NW_024969743.1 1059814 1061505 - calreticulin aug3.g16253 LOC107441912 0
LOC107441910 Ptep1.0/2.0 NW_024969743.1 1070140 1121463 + SUN domain-containing protein 1 aug3.g16254 LOC107441910 0
LOC107447145 Ptep1.0/2.0 NW_024969812.1 222012 244477 - methylcrotonoyl-CoA carboxylase beta chain, mitochondrial aug3.g1625 LOC107447145 0
LOC107449702 Ptep1.0/2.0 NW_024969920.1 2329674 2363031 - uncharacterized LOC107449702 aug3.g20889,aug3.g16250 LOC107449702 0
LOC107444569 Ptep1.0/2.0 NW_024970129.1 5291 43638 + uncharacterized protein CG3556 aug3.g17954,aug3.g16256 LOC107444569 0
LOC107441916 Ptep1.0/2.0 NW_024970129.1 92197 133596 + signal-induced proliferation-associated 1-like protein 1 aug3.g16257,aug3.g20585 LOC107441916 0
LOC122271517 Ptep1.0/2.0 NW_024970893.1 151874 156849 + uncharacterized LOC122271517 aug3.g18696,aug3.g16255,aug3.g15025 NA 0
LOC107444349 Ptep1.0/2.0 NW_024971048.1 166801 171255 - zinc finger protein 271-like aug3.g16254 LOC107444349 4e-159
LOC107441917 Ptep1.0/2.0 NW_024971843.1 25392 113683 - paramyosin aug3.g16258,aug3.g23006,aug3.g19654 LOC107441917 0
LOC122272852 Ptep1.0/2.0 NW_024973070.1 710 4289 + zinc finger protein 271-like aug3.g16254 NA 0
LOC122272850 Ptep1.0/2.0 NW_024973070.1 10292 13290 - SUN domain-containing protein 1-like aug3.g16254 LOC107441910 0
LOC122273026 Ptep1.0/2.0 NW_024973772.1 867 7367 + uncharacterized LOC122273026 aug3.g16258 NA 3e-107
14 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02