Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107442129 Ptep1.0/2.0 NW_024969699.1 539114 553529 - V-type proton ATPase subunit d 1 aug3.g16379 LOC107442129 0
LOC107442126 Ptep1.0/2.0 NW_024969699.1 553773 562071 + dynein light chain roadblock-type 2 aug3.g16378 LOC107442126 0
LOC107442131 Ptep1.0/2.0 NW_024969699.1 568271 583341 + glutathione synthetase aug3.g16377 LOC107442131 0
LOC107442128 Ptep1.0/2.0 NW_024969699.1 585880 596674 - peptidyl-prolyl cis-trans isomerase B aug3.g16376 LOC107442128 0
LOC107442132 Ptep1.0/2.0 NW_024969699.1 596916 604578 + glycine cleavage system H protein, mitochondrial aug3.g16375 LOC107442132 0
LOC107442127 Ptep1.0/2.0 NW_024969699.1 605996 1129701 - neuron navigator 2 aug3.g16374,aug3.g11225 LOC107442127 0
LOC107447184 Ptep1.0/2.0 NW_024969738.1 883252 906911 + uncharacterized LOC107447184 aug3.g1637 LOC107447184 0
LOC107436355 Ptep1.0/2.0 NW_024969815.1 763066 807749 - oocyte zinc finger protein XlCOF6.1 aug3.g18966,aug3.g16370,aug3.g11139,aug3.g23931,aug3.g10099,aug3.g19028,aug3.g26680,aug3.g658,aug3.g6866,aug3.g3777,aug3.g13767,aug3.g1246,aug3.g20365,aug3.g12813,aug3.g18681,aug3.g5858,aug3.g20791,aug3.g17997,aug3.g11223,aug3.g15649,aug3.g3781,aug3.g2204 LOC107454207,LOC107436355 0
LOC107457269 Ptep1.0/2.0 NW_024970169.1 306174 324833 - uncharacterized LOC107457269 aug3.g16370 LOC107457269 0
LOC107442122 Ptep1.0/2.0 NW_024971265.1 1124 15042 + pancreatic lipase-related protein 3-like aug3.g16373 LOC107442122 0
LOC107442125 Ptep1.0/2.0 NW_024971265.1 29383 74469 + GTP cyclohydrolase 1 aug3.g16372 LOC107442125 0
LOC107442123 Ptep1.0/2.0 NW_024971265.1 80858 109243 - RNA-binding protein Rsf1 aug3.g16371 LOC107442123 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02