Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107436252 Ptep1.0/2.0 NW_024970121.1 126360 132187 + tigger transposable element-derived protein 6 aug3.g8728,aug3.g1660,aug3.g1004 LOC107436252 0
LOC107442473 Ptep1.0/2.0 NW_024970527.1 255175 292464 + solute carrier family 41 member 1 aug3.g16608,aug3.g13121 LOC107442473 0
LOC107442472 Ptep1.0/2.0 NW_024970527.1 306536 313841 + uncharacterized LOC107442472 aug3.g16609 LOC107442472 0
LOC107438455 Ptep1.0/2.0 NW_024970530.1 185898 186914 + uncharacterized LOC107438455 aug3.g13110,aug3.g24884,aug3.g24505,aug3.g2890,aug3.g21257,aug3.g22565,aug3.g18708,aug3.g16605,aug3.g25397,aug3.g10779,aug3.g236,aug3.g26808 LOC107438455 0
LOC122271556 Ptep1.0/2.0 NW_024970931.1 128595 156281 + uncharacterized LOC122271556 aug3.g16600,aug3.g16629 NA 0
LOC107442470 Ptep1.0/2.0 NW_024971346.1 29142 29705 + ribonuclease H-like aug3.g16605 LOC107442470 0
LOC122268647 Ptep1.0/2.0 NW_025014238.1 97 1319 - uncharacterized protein K02A2.6-like aug3.g16602 NA 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02