Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443547 Ptep1.0/2.0 NW_024970008.1 437053 457244 - uncharacterized LOC107443547 aug3.g17303,aug3.g16628 LOC107443547 0
LOC122270288 Ptep1.0/2.0 NW_024970121.1 111408 111791 - uncharacterized LOC122270288 aug3.g1662 NA 0
LOC107442501 Ptep1.0/2.0 NW_024970577.1 617414 696569 - angiopoietin-related protein 7-like aug3.g18310,aug3.g16620 LOC107442501 0
LOC107442502 Ptep1.0/2.0 NW_024970577.1 641695 679377 + E3 ubiquitin-protein ligase TRIP12 aug3.g16621 LOC107442502 0
LOC122271556 Ptep1.0/2.0 NW_024970931.1 128595 156281 + uncharacterized LOC122271556 aug3.g16600,aug3.g16629 NA 0
LOC107442505 Ptep1.0/2.0 NW_024971025.1 5516 11368 + protein asteroid homolog 1 aug3.g16625 LOC107442505 0
LOC107450298 Ptep1.0/2.0 NW_024971025.1 35183 47171 + protein asteroid homolog 1-like aug3.g16627,aug3.g3266 LOC107450298 0
LOC107442509 Ptep1.0/2.0 NW_024971911.1 4984 17452 + protein asteroid homolog 1 aug3.g16623 LOC107442509 0
LOC107442507 Ptep1.0/2.0 NW_024971911.1 24733 33072 + protein asteroid homolog 1-like aug3.g3979,aug3.g16624,aug3.g16623 LOC107442507 0
LOC122272934 Ptep1.0/2.0 NW_024973357.1 7 8860 - protein asteroid homolog 1-like aug3.g16623 NA 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02