Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447342 Ptep1.0/2.0 NW_024969674.1 62995 180689 + tyrosine-protein phosphatase 99A aug3.g1689 LOC107447342 0
LOC122268811 Ptep1.0/2.0 NW_024969680.1 1443089 1444945 - uncharacterized LOC122268811 aug3.g16895 NA 3e-77
LOC107438774 Ptep1.0/2.0 NW_024969684.1 1144424 1145092 - uncharacterized LOC107438774 aug3.g18247,aug3.g17657,aug3.g16895,aug3.g24984,aug3.g23162 LOC107438774 0
LOC107442897 Ptep1.0/2.0 NW_024969906.1 697045 706666 - peroxisomal membrane protein 11C aug3.g16895 LOC107442897 0
LOC107442895 Ptep1.0/2.0 NW_024969906.1 706801 712161 + F-box/LRR-repeat protein 12 aug3.g16896 LOC107442895 0
LOC107442894 Ptep1.0/2.0 NW_024969906.1 721423 738865 - integral membrane protein GPR180 aug3.g16897 LOC107442894 0
LOC107442896 Ptep1.0/2.0 NW_024969906.1 739077 749265 + uncharacterized LOC107442896 aug3.g16898 LOC107442896 0
LOC107442891 Ptep1.0/2.0 NW_024970711.1 178971 212744 - zinc finger protein ush aug3.g16893 LOC107442891 0
LOC107442892 Ptep1.0/2.0 NW_024970736.1 174853 205966 - protein CBFA2T1 aug3.g16894 LOC107442892 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02