Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447346 Ptep1.0/2.0 NW_024969674.1 577043 593524 - uncharacterized LOC107447346 aug3.g1696 LOC107447346 0
LOC107438137 Ptep1.0/2.0 NW_024969793.1 699616 824568 + formin-J-like aug3.g26411,aug3.g15945,aug3.g16965,aug3.g18789,aug3.g3845,aug3.g20638,aug3.g27431,aug3.g11569,aug3.g26749,aug3.g13556,aug3.g568,aug3.g15812,aug3.g22828,aug3.g12149,aug3.g5637,aug3.g892,aug3.g8296,aug3.g18962,aug3.g6082,aug3.g24558,aug3.g9808,aug3.g2790,a LOC107438137 0
LOC107442970 Ptep1.0/2.0 NW_024969804.1 943370 992436 + F-BAR domain only protein 2 aug3.g16960,aug3.g16961 LOC107442970 0
LOC107442981 Ptep1.0/2.0 NW_024969832.1 974721 1020273 + serine--pyruvate aminotransferase aug3.g16968 LOC107442981 0
LOC107442975 Ptep1.0/2.0 NW_024969878.1 802605 885610 + glycerophosphocholine cholinephosphodiesterase ENPP6-like aug3.g16964,aug3.g8381 LOC107442975 0
LOC107442976 Ptep1.0/2.0 NW_024971186.1 12783 15137 - zinc finger protein 2-like aug3.g16967 LOC107442976 8e-138
LOC107442983 Ptep1.0/2.0 NW_024971186.1 20480 22367 - zinc finger protein 2 homolog aug3.g16967 LOC107442983 0
LOC107442980 Ptep1.0/2.0 NW_024971186.1 22473 48264 + protein prune homolog 2 aug3.g16967,aug3.g17682 LOC107442980 0
LOC107442977 Ptep1.0/2.0 NW_024971186.1 59465 65533 - small proline-rich protein 2H-like aug3.g16966 LOC107442977 0
LOC122272214 Ptep1.0/2.0 NW_024971641.1 7621 59935 - zinc finger CCCH domain-containing protein 14-like aug3.g16963 NA 0
LOC107440039 Ptep1.0/2.0 NW_024971720.1 29582 52316 - serine--pyruvate aminotransferase aug3.g16968,aug3.g25490 LOC107440039 0
LOC107442974 Ptep1.0/2.0 NW_024971897.1 21572 43559 - uncharacterized LOC107442974 aug3.g10981,aug3.g16963,aug3.g18656,aug3.g19563,aug3.g22264,aug3.g20077 LOC107442974 0
LOC107442984 Ptep1.0/2.0 NW_024971940.1 5871 20443 - uncharacterized LOC107442984 aug3.g16969 LOC107442984 0
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02