Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447328 Ptep1.0/2.0 NW_024969674.1 650383 786119 + feline leukemia virus subgroup C receptor-related protein 2 aug3.g1700 LOC107447328 0
LOC107443029 Ptep1.0/2.0 NW_024969677.1 924488 925840 + adrenocorticotropic hormone receptor-like aug3.g17005 LOC107443029 0
LOC107443032 Ptep1.0/2.0 NW_024970008.1 573656 599467 - thioredoxin reductase 1, cytoplasmic aug3.g17009 LOC107443032 0
LOC107443035 Ptep1.0/2.0 NW_024970008.1 624765 635402 + DNA-(apurinic or apyrimidinic site) endonuclease 2 aug3.g17007 LOC107443035 0
LOC107443031 Ptep1.0/2.0 NW_024970008.1 664280 672988 - ras-related protein RABC2a-like aug3.g17006 LOC107443031 0
LOC107439194 Ptep1.0/2.0 NW_024970656.1 11774 17295 - uncharacterized LOC107439194 aug3.g13618,aug3.g1555,aug3.g5180,aug3.g17008,aug3.g23416,aug3.g26451,aug3.g23618 LOC107439194 0
LOC107442723 Ptep1.0/2.0 NW_024971162.1 135728 139748 - uncharacterized LOC107442723 aug3.g19745,aug3.g16788,aug3.g2875,aug3.g17006,aug3.g22665 LOC107442723 0
LOC107443026 Ptep1.0/2.0 NW_024972186.1 7045 50078 - uncharacterized LOC107443026 aug3.g17003 LOC107443026 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02