Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447329 Ptep1.0/2.0 NW_024969674.1 831221 857131 - myotubularin-related protein 2 aug3.g1702,aug3.g24277 LOC107447329,LOC107442515 0
LOC122268984 Ptep1.0/2.0 NW_024969710.1 1090750 1092622 + tigger transposable element-derived protein 4-like aug3.g10676,aug3.g24229,aug3.g24228,aug3.g17025,aug3.g7884 NA 0
LOC122270547 Ptep1.0/2.0 NW_024970233.1 1067 1696 + secreted RxLR effector protein 161-like aug3.g18577,aug3.g17029 NA 0
LOC107443059 Ptep1.0/2.0 NW_024970720.1 26161 33769 - cysteine-rich protein 1-like aug3.g17023 LOC107443059 0
LOC107443058 Ptep1.0/2.0 NW_024970720.1 44374 81825 + uncharacterized LOC107443058 aug3.g17022 LOC107443058 0
LOC122268273 Ptep1.0/2.0 NW_024970720.1 90891 102616 + uncharacterized LOC122268273 aug3.g17022 LOC107443058 0
LOC107450165 Ptep1.0/2.0 NW_024970720.1 125495 167785 - cubilin aug3.g17021,aug3.g21105 LOC107450165 0
LOC107443062 Ptep1.0/2.0 NW_024970923.1 37095 124041 + ATP-citrate synthase aug3.g17028,aug3.g18072 LOC107443062 0
LOC107443063 Ptep1.0/2.0 NW_024970923.1 123973 158187 - glycosyltransferase-like domain-containing protein 1 aug3.g17027 LOC107443063 0
LOC107443061 Ptep1.0/2.0 NW_024970923.1 158265 182926 + protein rogdi aug3.g17026 LOC107443061 0
LOC122271548 Ptep1.0/2.0 NW_024970923.1 175523 181530 - uncharacterized LOC122271548 aug3.g17026 NA 9e-33
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02