Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447382 Ptep1.0/2.0 NW_024969731.1 865412 866705 - protein lethal(2)essential for life aug3.g1733 LOC107447382 0
LOC107443583 Ptep1.0/2.0 NW_024969864.1 522611 538561 + diphthine methyltransferase-like aug3.g17338 LOC107443583 0
LOC107443584 Ptep1.0/2.0 NW_024969864.1 526998 527345 + cyclin-dependent kinase 2-associated protein 1 aug3.g17339 LOC107443584 0
LOC107443589 Ptep1.0/2.0 NW_024969864.1 541579 542597 + pre-mRNA-splicing factor SYF2 aug3.g17337 LOC107443589 0
LOC107443577 Ptep1.0/2.0 NW_024969864.1 554679 572405 - signal recognition particle subunit SRP68 aug3.g17336 LOC107443577 0
LOC107443579 Ptep1.0/2.0 NW_024969864.1 572448 579985 + 40S ribosomal protein S2 aug3.g17335 LOC107443579 0
LOC107443582 Ptep1.0/2.0 NW_024969864.1 588936 624454 + uncharacterized LOC107443582 aug3.g17332,aug3.g26993 LOC107443582 0
LOC107443581 Ptep1.0/2.0 NW_024969864.1 589194 594249 + uncharacterized LOC107443581 aug3.g17333 LOC107443581 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02