Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446817 Ptep1.0/2.0 NW_024969601.1 1395489 1398956 + uncharacterized LOC107446817 aug3.g17371,aug3.g1474,aug3.g21423,aug3.g1664 LOC107446817 0
LOC107443655 Ptep1.0/2.0 NW_024969699.1 1221185 1246480 + uncharacterized LOC107443655 aug3.g17373 LOC107443655 0
LOC107447391 Ptep1.0/2.0 NW_024969731.1 916193 933433 - protein tumorous imaginal discs, mitochondrial aug3.g1737 LOC107447391 0
LOC107438312 Ptep1.0/2.0 NW_024969924.1 833245 834705 - uncharacterized LOC107438312 aug3.g12980,aug3.g17372,aug3.g17392 LOC107438312 0
LOC107443656 Ptep1.0/2.0 NW_024969932.1 809183 897612 - transcriptional regulator ATRX homolog aug3.g17375 LOC107443656 0
LOC107436444 Ptep1.0/2.0 NW_024970916.1 108570 115282 - uncharacterized LOC107436444 aug3.g17379 LOC107436444 0
LOC122272386 Ptep1.0/2.0 NW_024971923.1 29907 35168 - uncharacterized LOC122272386 aug3.g17379 NA 4e-122
LOC107439287 Ptep1.0/2.0 NW_024972062.1 10387 31159 + uncharacterized LOC107439287 aug3.g17379,aug3.g11193 LOC107439287 0
LOC107442848 Ptep1.0/2.0 NW_024972274.1 24952 27219 + uncharacterized LOC107442848 aug3.g17371,aug3.g15852,aug3.g16734 LOC107442848 0
LOC107442847 Ptep1.0/2.0 NW_024972302.1 13522 15873 - uncharacterized LOC107442847 aug3.g16873,aug3.g24733,aug3.g17371 LOC107442847 0
LOC122268587 Ptep1.0/2.0 NW_025003094.1 53 995 + uncharacterized LOC122268587 aug3.g17371 NA 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02