Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443893 Ptep1.0/2.0 NW_024969670.1 324147 594396 + myelin transcription factor 1-like protein aug3.g17532 LOC107443893 0
LOC107443892 Ptep1.0/2.0 NW_024969670.1 604048 629035 - nose resistant to fluoxetine protein 6-like aug3.g17531 LOC107443892 0
LOC107439907 Ptep1.0/2.0 NW_024969746.1 2700125 2801848 - inositol 1,4,5-trisphosphate receptor aug3.g14115,aug3.g1753,aug3.g1752,aug3.g22764 LOC107439907,LOC107452198,LOC107447416 0
LOC107443894 Ptep1.0/2.0 NW_024969868.1 729485 806060 + sodium-dependent serotonin transporter aug3.g17533 LOC107443894 0
LOC107443896 Ptep1.0/2.0 NW_024969868.1 815224 827850 - uncharacterized LOC107443896 aug3.g17534 LOC107443896 0
LOC107443897 Ptep1.0/2.0 NW_024969868.1 855775 859774 - sulfotransferase ssu-1 aug3.g17536,aug3.g18898,aug3.g18897,aug3.g21148 LOC107443897 0
LOC107443891 Ptep1.0/2.0 NW_024970960.1 144624 165308 - 26S proteasome non-ATPase regulatory subunit 10 aug3.g17530 LOC107443891 0
LOC122273400 Ptep1.0/2.0 NW_024975853.1 6164 6989 - uncharacterized LOC122273400 aug3.g1753 NA 2e-154
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02