Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447467 Ptep1.0/2.0 NW_024969816.1 53089 54694 + putative ankyrin repeat protein RF_0381 aug3.g1767 LOC107447467 0
LOC107444190 Ptep1.0/2.0 NW_024969861.1 233016 255266 - 3-methyl-2-oxobutanoate dehydrogenase [lipoamide] kinase, mitochondrial aug3.g17673,aug3.g20813 LOC107444190 0
LOC107438901 Ptep1.0/2.0 NW_024970062.1 6014 34493 - uncharacterized LOC107438901 aug3.g13449,aug3.g19865,aug3.g19863,aug3.g19111,aug3.g15841,aug3.g21682,aug3.g22706,aug3.g10878,aug3.g17675,aug3.g17718,aug3.g16185,aug3.g14065,aug3.g10641,aug3.g17719,aug3.g12613,aug3.g27455 LOC107438901 0
LOC107444192 Ptep1.0/2.0 NW_024970070.1 26265 106920 - tachykinin-like peptides receptor 86C aug3.g17677 LOC107444192 0
LOC107444191 Ptep1.0/2.0 NW_024971082.1 126413 146453 + uncharacterized LOC107444191 aug3.g17675 LOC107444191 0
LOC107441844 Ptep1.0/2.0 NW_024971877.1 29682 44792 + uncharacterized LOC107441844 aug3.g17675 LOC107441844 0
LOC122272425 Ptep1.0/2.0 NW_024971985.1 3899 26653 - uncharacterized LOC122272425 aug3.g17671 NA 7e-169
LOC122273181 Ptep1.0/2.0 NW_024974584.1 6193 6810 - uncharacterized LOC122273181 aug3.g17676 NA 1e-156
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02