Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447458 Ptep1.0/2.0 NW_024969816.1 171825 275133 - uncharacterized LOC107447458 aug3.g1774 LOC107447458 0
LOC107444279 Ptep1.0/2.0 NW_024969840.1 31448 34846 + uncharacterized LOC107444279 aug3.g17747 LOC107444279 0
LOC107444280 Ptep1.0/2.0 NW_024969840.1 50274 55345 + uncharacterized LOC107444280 aug3.g17746 LOC107444280 0
LOC107444285 Ptep1.0/2.0 NW_024969840.1 84192 87414 - zinc finger CCCH domain-containing protein 10 aug3.g17745 LOC107444285 0
LOC107444284 Ptep1.0/2.0 NW_024969840.1 87541 89783 + zinc finger CCCH domain-containing protein 10 aug3.g17744 LOC107444284 0
LOC107444283 Ptep1.0/2.0 NW_024969840.1 93150 103685 - kinetochore protein Spc25 aug3.g17743,aug3.g17744 LOC107444283 0
LOC107443491 Ptep1.0/2.0 NW_024969840.1 209037 212483 - uncharacterized LOC107443491 aug3.g27987,aug3.g17748,aug3.g17746,aug3.g17747,aug3.g21211,aug3.g17627 LOC107443491 0
LOC107444281 Ptep1.0/2.0 NW_024970095.1 726093 729092 + uncharacterized LOC107444281 aug3.g17748 LOC107444281 0
LOC110282725 Ptep1.0/2.0 NW_024970658.1 206248 212524 + uncharacterized LOC110282725 aug3.g17740 LOC110282725 1e-139
LOC107444275 Ptep1.0/2.0 NW_024970658.1 215055 233051 + ctenidin-1-like aug3.g17738,aug3.g17740,aug3.g2997,aug3.g3000 LOC107444275 0
LOC122271244 Ptep1.0/2.0 NW_024970658.1 238582 245060 + cuticle collagen 2-like aug3.g17740 LOC107444275 0
LOC122271243 Ptep1.0/2.0 NW_024970658.1 247652 250486 + putative polyketide hydroxylase aug3.g17741 LOC107444275 0
LOC110282727 Ptep1.0/2.0 NW_024971589.1 44589 50875 - cuticle collagen 2-like aug3.g17740 LOC110282727 0
LOC122272175 Ptep1.0/2.0 NW_024971589.1 53900 62303 - uncharacterized LOC122272175 aug3.g17740 NA 1e-122
LOC107449867 Ptep1.0/2.0 NW_024971734.1 12775 46341 + cuticle collagen 2-like aug3.g17738,aug3.g17741 LOC107449867 0
LOC107444272 Ptep1.0/2.0 NW_024975876.1 910 2311 - uncharacterized LOC107444272 aug3.g17742 LOC107444272 5e-147
16 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02