Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444322 Ptep1.0/2.0 NW_024969684.1 592233 738026 - LIM domain only protein 3 aug3.g17786 LOC107444322 0
LOC107447462 Ptep1.0/2.0 NW_024969816.1 452225 599205 - mucin-17 aug3.g1778 LOC107447462 0
LOC107443006 Ptep1.0/2.0 NW_024969891.1 635818 654564 - tigger transposable element-derived protein 4-like aug3.g9934,aug3.g10105,aug3.g18192,aug3.g6186,aug3.g17788,aug3.g9969,aug3.g192,aug3.g12457,aug3.g22897,aug3.g1740,aug3.g20926,aug3.g19047,aug3.g14633,aug3.g5371,aug3.g25913,aug3.g21109,aug3.g9935,aug3.g1678,aug3.g15883,aug3.g21072,aug3.g10535,aug3.g13475, LOC107443006 0
LOC107444318 Ptep1.0/2.0 NW_024970053.1 325269 326508 - dnaJ homolog subfamily C member 30, mitochondrial aug3.g17784 LOC107444318 0
LOC107444319 Ptep1.0/2.0 NW_024970053.1 326601 327380 + dnaJ homolog subfamily B member 9-like aug3.g17783 LOC107444319 0
LOC107444317 Ptep1.0/2.0 NW_024970053.1 332078 345462 - vacuolar protein sorting-associated protein 37B aug3.g17782,aug3.g17783 LOC107444317 0
LOC107444316 Ptep1.0/2.0 NW_024970053.1 355181 501442 - uncharacterized LOC107444316 aug3.g17781 LOC107444316 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02