Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444705 Ptep1.0/2.0 NW_024969653.1 1472468 1507517 - uncharacterized LOC107444705 aug3.g18031 LOC107444705 0
LOC107445808 Ptep1.0/2.0 NW_024969680.1 2077688 2092864 - uncharacterized LOC107445808 aug3.g18034 LOC107445808 0
LOC107447539 Ptep1.0/2.0 NW_024970034.1 448763 461926 + DNA replication complex GINS protein SLD5 aug3.g1803 LOC107447539 0
LOC107436596 Ptep1.0/2.0 NW_024970702.1 45271 136247 + uncharacterized LOC107436596 aug3.g9447,aug3.g9446,aug3.g18684,aug3.g20031,aug3.g13166,aug3.g18034,aug3.g13168,aug3.g8230,aug3.g19472,aug3.g1173 LOC107436596 0
LOC107444709 Ptep1.0/2.0 NW_024971154.1 7419 19917 - biogenesis of lysosome-related organelles complex 1 subunit 3 aug3.g18035 LOC107444709 0
LOC107444707 Ptep1.0/2.0 NW_024971154.1 39829 47071 + ARMADILLO BTB ARABIDOPSIS PROTEIN 1-like aug3.g18038 LOC107444707 0
LOC107444711 Ptep1.0/2.0 NW_024971154.1 54547 61478 + uncharacterized LOC107444711 aug3.g18039 LOC107444711 0
LOC122272833 Ptep1.0/2.0 NW_024972988.1 4590 5087 + uncharacterized LOC122272833 aug3.g21195,aug3.g18030,aug3.g1775,aug3.g3151,aug3.g18048,aug3.g11229,aug3.g13917,aug3.g23670,aug3.g101,aug3.g5304,aug3.g2007,aug3.g4720,aug3.g1160,aug3.g18760,aug3.g4669 NA 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02