Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107438146 Ptep1.0/2.0 NW_024969924.1 831807 832929 - uncharacterized LOC107438146 aug3.g24010,aug3.g18188 LOC107438146 0
LOC107439188 Ptep1.0/2.0 NW_024970012.1 684254 746383 + pseudogene aug3.g26718,aug3.g18189,aug3.g11205,aug3.g19 LOC107439188 0
LOC107436666 Ptep1.0/2.0 NW_024970223.1 119519 120643 + uncharacterized LOC107436666 aug3.g11745,aug3.g5237,aug3.g18186 LOC107436666 0
LOC107447588 Ptep1.0/2.0 NW_024970391.1 436997 457601 + serine/arginine-rich splicing factor 4 aug3.g1818 LOC107447588 0
LOC107451667 Ptep1.0/2.0 NW_024970495.1 11066 16375 + uncharacterized LOC107451667 aug3.g17854,aug3.g18395,aug3.g18187 LOC107451667 0
LOC107444910 Ptep1.0/2.0 NW_024971179.1 47205 55798 + uncharacterized LOC107444910 aug3.g18183 LOC107444910 0
LOC107444913 Ptep1.0/2.0 NW_024971179.1 66013 83293 - uncharacterized LOC107444913 aug3.g18182 LOC107444913 0
LOC107444912 Ptep1.0/2.0 NW_024971179.1 84810 141887 - peroxidase aug3.g18181 LOC107444912 0
LOC122268400 Ptep1.0/2.0 NW_024971179.1 157728 159590 + SCAN domain-containing protein 3-like aug3.g15756,aug3.g18180,aug3.g1799,aug3.g17360 NA 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02