Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447631 Ptep1.0/2.0 NW_024969691.1 1553531 1579644 + mitochondrial Rho GTPase 1 aug3.g1846 LOC107447631 0
LOC107445316 Ptep1.0/2.0 NW_024970195.1 1408 38413 - prolyl 4-hydroxylase subunit alpha-1-like aug3.g18469 LOC107445317,LOC107445316 0
LOC107445309 Ptep1.0/2.0 NW_024970207.1 278801 296132 - pre-mRNA-splicing factor RBM22 aug3.g18460,aug3.g18461 LOC107445309 0
LOC107445311 Ptep1.0/2.0 NW_024970207.1 306269 323359 - pre-mRNA-splicing factor RBM22 aug3.g18461 LOC107445311 0
LOC107445314 Ptep1.0/2.0 NW_024970207.1 333974 348710 - lysosome-associated membrane glycoprotein 2 aug3.g18462 LOC107445314 0
LOC107445312 Ptep1.0/2.0 NW_024970207.1 360970 371494 - serine/threonine-protein kinase mos aug3.g18464 LOC107445312 0
LOC107445315 Ptep1.0/2.0 NW_024970353.1 383999 387571 + uncharacterized LOC107445315 aug3.g18466,aug3.g18465 LOC107445315 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02