Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107438165 Ptep1.0/2.0 NW_024969643.1 842359 1049624 - uncharacterized LOC107438165 aug3.g18512 LOC107438165 7e-45
LOC107447165 Ptep1.0/2.0 NW_024969768.1 1024645 1047407 + flavin-containing monooxygenase FMO GS-OX-like 2 aug3.g19583,aug3.g18510 LOC107447165 0
LOC122270073 Ptep1.0/2.0 NW_024970039.1 535228 536207 + uncharacterized LOC122270073 aug3.g18510 NA 0
LOC107447656 Ptep1.0/2.0 NW_024970442.1 202463 240307 + protein atonal homolog 8 aug3.g1851 LOC107447656 0
LOC122271712 Ptep1.0/2.0 NW_024971075.1 168194 172800 - uncharacterized LOC122271712 aug3.g18520,aug3.g18519,aug3.g2036 NA 0
LOC107445392 Ptep1.0/2.0 NW_024971435.1 89 12973 + L-2-hydroxyglutarate dehydrogenase, mitochondrial aug3.g18513 LOC107445392 0
LOC107445390 Ptep1.0/2.0 NW_024971435.1 18723 48042 - uncharacterized LOC107445390 aug3.g18514 LOC107445390 0
LOC107445389 Ptep1.0/2.0 NW_024971435.1 32689 69444 + protein Malvolio aug3.g18515 LOC107445389 0
LOC122272053 Ptep1.0/2.0 NW_024971435.1 78498 79301 - uncharacterized LOC122272053 aug3.g18519 NA 0
LOC122272094 Ptep1.0/2.0 NW_024971487.1 1253 4992 + natural resistance-associated macrophage protein 2-like aug3.g18515 LOC107445389 4e-129
LOC107445388 Ptep1.0/2.0 NW_024971487.1 6965 68580 - protein Malvolio aug3.g18516 LOC107445388 0
LOC122268412 Ptep1.0/2.0 NW_024971487.1 7058 17062 + uncharacterized LOC122268412 aug3.g18516 LOC107445389 4e-36
LOC122272095 Ptep1.0/2.0 NW_024971487.1 21940 23121 + tigger transposable element-derived protein 6-like aug3.g18517 NA 0
LOC107437654 Ptep1.0/2.0 NW_024971504.1 43536 44132 + tigger transposable element-derived protein 6-like aug3.g12490,aug3.g18517 LOC107437654 0
LOC122273422 Ptep1.0/2.0 NW_024975983.1 1301 3731 + uncharacterized LOC122273422 aug3.g18518 NA 2e-101
15 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02