Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445438 Ptep1.0/2.0 NW_024969967.1 789230 794772 - peptidoglycan-recognition protein LB-like aug3.g18554 LOC107445438 0
LOC122270479 Ptep1.0/2.0 NW_024970201.1 12130 32999 + filaggrin-like aug3.g18558,aug3.g18560,aug3.g18559 NA 0
LOC122270480 Ptep1.0/2.0 NW_024970201.1 46786 54480 + dentin sialophosphoprotein-like aug3.g18557 NA 0
LOC107445457 Ptep1.0/2.0 NW_024970201.1 59208 89878 + chromatin-remodeling complex ATPase chain Iswi aug3.g18556,aug3.g12178,aug3.g12177 LOC107445457 0
LOC107447651 Ptep1.0/2.0 NW_024970442.1 18729 40945 - uncharacterized LOC107447651 aug3.g1855,aug3.g1854 LOC107447651 0
LOC107443815 Ptep1.0/2.0 NW_024970636.1 611 12474 + 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase aug3.g18550 LOC107443815 0
LOC107445439 Ptep1.0/2.0 NW_024970636.1 16292 37738 + neural Wiskott-Aldrich syndrome protein aug3.g18551 LOC107445439 0
LOC122271203 Ptep1.0/2.0 NW_024970636.1 38707 52036 - peptidoglycan-recognition protein SC2-like aug3.g18552 NA 0
LOC107445441 Ptep1.0/2.0 NW_024971056.1 26115 156566 - unconventional myosin-Va aug3.g18555,aug3.g20377 LOC107445441 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02