Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122268981 Ptep1.0/2.0 NW_024969709.1 4327 4982 - uncharacterized LOC122268981 aug3.g1869 NA 1e-16
LOC107449470 Ptep1.0/2.0 NW_024970438.1 7332 11258 - uncharacterized LOC107449470 aug3.g6431,aug3.g14252,aug3.g15024,aug3.g9027,aug3.g25356,aug3.g18696,aug3.g5452,aug3.g19414,aug3.g15953,aug3.g15952 LOC107449470 0
LOC122271384 Ptep1.0/2.0 NW_024970770.1 158483 160306 + uncharacterized LOC122271384 aug3.g18692 NA 3e-82
LOC122271517 Ptep1.0/2.0 NW_024970893.1 151874 156849 + uncharacterized LOC122271517 aug3.g18696,aug3.g16255,aug3.g15025 NA 0
LOC107445703 Ptep1.0/2.0 NW_024971039.1 50150 83255 + cyclin-T1 aug3.g18699,aug3.g1052 LOC107445703 0
LOC107447686 Ptep1.0/2.0 NW_024971199.1 106231 116391 - 40S ribosomal protein S6 aug3.g1869 LOC107447686 0
LOC122272654 Ptep1.0/2.0 NW_024972464.1 17119 17766 - uncharacterized LOC122272654 aug3.g18696 NA 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02