Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445732 Ptep1.0/2.0 NW_024969772.1 772304 872704 + fibropellin-1 aug3.g18705 LOC107445732 0
LOC107445737 Ptep1.0/2.0 NW_024970056.1 49004 49687 - uncharacterized LOC107445737 aug3.g18708 LOC107445737 0
LOC107445735 Ptep1.0/2.0 NW_024970486.1 294316 312316 + NAD kinase 2, mitochondrial aug3.g18707 LOC107445735 0
LOC107438455 Ptep1.0/2.0 NW_024970530.1 185898 186914 + uncharacterized LOC107438455 aug3.g13110,aug3.g24884,aug3.g24505,aug3.g2890,aug3.g21257,aug3.g22565,aug3.g18708,aug3.g16605,aug3.g25397,aug3.g10779,aug3.g236,aug3.g26808 LOC107438455 0
LOC122268381 Ptep1.0/2.0 NW_024970552.1 315 11014 + autophagy-related protein 9A-like aug3.g18702 NA 0
LOC107445707 Ptep1.0/2.0 NW_024971039.1 90531 98103 + zinc finger protein 618 aug3.g18700 LOC107445707 0
LOC107445702 Ptep1.0/2.0 NW_024971039.1 103406 127234 - uncharacterized LOC107445702 aug3.g18701,aug3.g24797 LOC107445702 0
LOC107445704 Ptep1.0/2.0 NW_024971039.1 127330 153617 + autophagy-related protein 9A aug3.g18702,aug3.g11418 LOC107445704 0
LOC107439729 Ptep1.0/2.0 NW_024971127.1 131425 140542 + zinc finger protein 618 aug3.g14010,aug3.g18700,aug3.g22312 LOC110281923,LOC107439729 0
LOC107447693 Ptep1.0/2.0 NW_024971199.1 87269 99587 + probable ribosome biogenesis protein RLP24 aug3.g1870,aug3.g22751 LOC107447693 0
LOC107450558 Ptep1.0/2.0 NW_024974073.1 1009 5869 + probable ribosome biogenesis protein RLP24 aug3.g1870 LOC107450558 0
LOC122273749 Ptep1.0/2.0 NW_024979608.1 89 2600 - NAD kinase 2, mitochondrial-like aug3.g18707 LOC107445735 4e-124
LOC107445731 Ptep1.0/2.0 NW_025029430.1 107575 129330 - heterogeneous nuclear ribonucleoprotein R aug3.g18703,aug3.g9052 LOC107445731 0
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02