Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446482 Ptep1.0/2.0 NW_024969627.1 1520708 1606810 + uncharacterized LOC107446482 aug3.g19199,aug3.g22087,aug3.g22088 LOC107446482 0
LOC107454159 Ptep1.0/2.0 NW_024969641.1 1866804 1906022 - innexin shaking-B aug3.g23951,aug3.g19190 LOC107454159 0
LOC107446473 Ptep1.0/2.0 NW_024969641.1 1913183 1921423 + innexin shaking-B aug3.g19191 LOC107446473 0
LOC107446476 Ptep1.0/2.0 NW_024969641.1 1933233 1934310 + transcription initiation factor TFIID subunit 11 aug3.g19192 LOC107446476 0
LOC107446475 Ptep1.0/2.0 NW_024969641.1 1942450 1990759 - uncharacterized LOC107446475 aug3.g19193,aug3.g19194 LOC107446475,LOC107446474 0
LOC107447768 Ptep1.0/2.0 NW_024970237.1 140790 298092 - CRISP/Allergen/PR-1 aug3.g1919 LOC107447768 0
LOC107441489 Ptep1.0/2.0 NW_024970251.1 151254 152824 - zinc finger protein 271-like aug3.g19198 LOC107441489 1e-159
LOC107446477 Ptep1.0/2.0 NW_024970300.1 17266 54722 - clathrin heavy chain 1 aug3.g19195,aug3.g19999 LOC107446477 0
LOC122270652 Ptep1.0/2.0 NW_024970300.1 56332 60644 + 60S acidic ribosomal protein P2-like aug3.g19196 NA 2e-54
LOC107446481 Ptep1.0/2.0 NW_024970300.1 67051 78279 - 6-pyruvoyl tetrahydrobiopterin synthase aug3.g19197 LOC107446481 0
LOC107446480 Ptep1.0/2.0 NW_024970300.1 84107 86717 - zinc finger protein 271 aug3.g19198 LOC107446480 3e-157
LOC122271702 Ptep1.0/2.0 NW_024971064.1 10464 12960 - zinc finger protein 271-like aug3.g19198 NA 1e-151
LOC107441486 Ptep1.0/2.0 NW_024972695.1 7149 10302 - zinc finger protein 271-like aug3.g19198 LOC107441486 6e-149
LOC107446478 Ptep1.0/2.0 NW_024974176.1 3815 5309 + 60S acidic ribosomal protein P2 aug3.g19196 LOC107446478 5e-129
LOC107454217 Ptep1.0/2.0 NW_024975056.1 254 4566 + metabotropic glutamate receptor 2-like aug3.g19199 LOC107454217 9e-120
LOC122273957 Ptep1.0/2.0 NW_024984835.1 13 1066 + uncharacterized LOC122273957 aug3.g19194 NA 3e-84
16 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02