Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447793 Ptep1.0/2.0 NW_024969605.1 175922 219143 - carboxypeptidase E aug3.g1924 LOC107447793 0
LOC107446531 Ptep1.0/2.0 NW_024969970.1 450336 462301 - protein lin-37 homolog aug3.g19240 LOC107446531 0
LOC107446527 Ptep1.0/2.0 NW_024969970.1 462466 476646 + myosin-11 aug3.g19241 LOC107446527 0
LOC107446534 Ptep1.0/2.0 NW_024970316.1 268577 278181 - astacin-like metalloprotease toxin 5 aug3.g19249,aug3.g19250 LOC107446534 0
LOC107446532 Ptep1.0/2.0 NW_024971235.1 43733 109965 - fibrillin-1-like aug3.g19245,aug3.g18239,aug3.g18240,aug3.g22217 LOC107446532 0
LOC107455680 Ptep1.0/2.0 NW_024971567.1 16201 45196 + uncharacterized LOC107455680 aug3.g8784,aug3.g8308,aug3.g7950,aug3.g4746,aug3.g19246,aug3.g11958,aug3.g4606 LOC107455680 0
LOC122272373 Ptep1.0/2.0 NW_024971889.1 19397 34866 + uncharacterized LOC122272373 aug3.g19243 LOC107446532 0
LOC122273795 Ptep1.0/2.0 NW_024980344.1 179 1329 - uncharacterized LOC122273795 aug3.g19247 NA 5e-134
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02